Gene : AT3G01290 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10264:SF90 - HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 3 Genomic Order:  32
Name:  ? AT3G01290 Secondary Identifier:  ? PAC:19662787
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G01290 0.5kb upstream 0.5kb upstream 1869 true Chr3: 88054-89922 Arabidopsis thaliana
AT3G01290 0.5kb upstream 0.5kb upstream 500 false Chr3: 89423-89922 Arabidopsis thaliana
AT3G01290 0.5kb downstream 0.5kb downstream 1869 true Chr3: 87554-89422 Arabidopsis thaliana
AT3G01290 0.5kb downstream 0.5kb downstream 500 false Chr3: 87554-88053 Arabidopsis thaliana
AT3G01290 1.0kb upstream 1.0kb upstream 2369 true Chr3: 88054-90422 Arabidopsis thaliana
AT3G01290 1.0kb upstream 1.0kb upstream 1000 false Chr3: 89423-90422 Arabidopsis thaliana
AT3G01290 1.0kb downstream 1.0kb downstream 2369 true Chr3: 87054-89422 Arabidopsis thaliana
AT3G01290 1.0kb downstream 1.0kb downstream 1000 false Chr3: 87054-88053 Arabidopsis thaliana
AT3G01290 2.0kb upstream 2.0kb upstream 3369 true Chr3: 88054-91422 Arabidopsis thaliana
AT3G01290 2.0kb upstream 2.0kb upstream 2000 false Chr3: 89423-91422 Arabidopsis thaliana
AT3G01290 2.0kb downstream 2.0kb downstream 3369 true Chr3: 86054-89422 Arabidopsis thaliana
AT3G01290 2.0kb downstream 2.0kb downstream 2000 false Chr3: 86054-88053 Arabidopsis thaliana
AT3G01290 5.0kb upstream 5.0kb upstream 6369 true Chr3: 88054-94422 Arabidopsis thaliana
AT3G01290 5.0kb upstream 5.0kb upstream 5000 false Chr3: 89423-94422 Arabidopsis thaliana
AT3G01290 5.0kb downstream 5.0kb downstream 6369 true Chr3: 83054-89422 Arabidopsis thaliana
AT3G01290 5.0kb downstream 5.0kb downstream 5000 false Chr3: 83054-88053 Arabidopsis thaliana
AT3G01290 10.0kb upstream 10.0kb upstream 11369 true Chr3: 88054-99422 Arabidopsis thaliana
AT3G01290 10.0kb upstream 10.0kb upstream 10000 false Chr3: 89423-99422 Arabidopsis thaliana
AT3G01290 10.0kb downstream 10.0kb downstream 11369 true Chr3: 78054-89422 Arabidopsis thaliana
AT3G01290 10.0kb downstream 10.0kb downstream 10000 false Chr3: 78054-88053 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027594 5273 Angiosperm View MSA
122363639 5261 Brassicaceae View MSA
123798584 5264 Brassicales-Malvales View MSA
124296200 5266 SBM View MSA
124252159 5268 Malvidae View MSA
124052393 5270 Rosid View MSA
123752499 5271 Pentapetalae View MSA
122798658 5272 Eudicot View MSA
121348601 5274 Embryophyte View MSA
123427890 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 332.051     High High
cufflinks 27.211        
cufflinks 129.761     High  
cufflinks 46.436     High  
cufflinks 228.431     High  
cufflinks 23.642       Low

0 Strain