Gene : UVH3 A. thaliana TAIR10
Primary Identifier:  ? AT3G28030 Defline:  (1 of 1) K10846 - DNA excision repair protein ERCC-5 (ERCC5, XPG, RAD2)
Genomic Order:  2967 Name:  ? AT3G28030
Secondary Identifier:  ? PAC:19663975
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0 Pathways

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G28030 0.5kb upstream 0.5kb upstream 7452 true Chr3: 10423753-10431204 Arabidopsis thaliana
AT3G28030 0.5kb upstream 0.5kb upstream 500 false Chr3: 10423753-10424252 Arabidopsis thaliana
AT3G28030 0.5kb downstream 0.5kb downstream 7452 true Chr3: 10424253-10431704 Arabidopsis thaliana
AT3G28030 0.5kb downstream 0.5kb downstream 500 false Chr3: 10431205-10431704 Arabidopsis thaliana
AT3G28030 1.0kb upstream 1.0kb upstream 7952 true Chr3: 10423253-10431204 Arabidopsis thaliana
AT3G28030 1.0kb upstream 1.0kb upstream 1000 false Chr3: 10423253-10424252 Arabidopsis thaliana
AT3G28030 1.0kb downstream 1.0kb downstream 7952 true Chr3: 10424253-10432204 Arabidopsis thaliana
AT3G28030 1.0kb downstream 1.0kb downstream 1000 false Chr3: 10431205-10432204 Arabidopsis thaliana
AT3G28030 2.0kb upstream 2.0kb upstream 8952 true Chr3: 10422253-10431204 Arabidopsis thaliana
AT3G28030 2.0kb upstream 2.0kb upstream 2000 false Chr3: 10422253-10424252 Arabidopsis thaliana
AT3G28030 2.0kb downstream 2.0kb downstream 8952 true Chr3: 10424253-10433204 Arabidopsis thaliana
AT3G28030 2.0kb downstream 2.0kb downstream 2000 false Chr3: 10431205-10433204 Arabidopsis thaliana
AT3G28030 5.0kb upstream 5.0kb upstream 11952 true Chr3: 10419253-10431204 Arabidopsis thaliana
AT3G28030 5.0kb upstream 5.0kb upstream 5000 false Chr3: 10419253-10424252 Arabidopsis thaliana
AT3G28030 5.0kb downstream 5.0kb downstream 11952 true Chr3: 10424253-10436204 Arabidopsis thaliana
AT3G28030 5.0kb downstream 5.0kb downstream 5000 false Chr3: 10431205-10436204 Arabidopsis thaliana
AT3G28030 10.0kb upstream 10.0kb upstream 16952 true Chr3: 10414253-10431204 Arabidopsis thaliana
AT3G28030 10.0kb upstream 10.0kb upstream 10000 false Chr3: 10414253-10424252 Arabidopsis thaliana
AT3G28030 10.0kb downstream 10.0kb downstream 16952 true Chr3: 10424253-10441204 Arabidopsis thaliana
AT3G28030 10.0kb downstream 10.0kb downstream 10000 false Chr3: 10431205-10441204 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368158 5261 Brassicaceae View MSA
123831872 5264 Brassicales-Malvales View MSA
124341202 5266 SBM View MSA
124243930 5268 Malvidae View MSA
124065041 5270 Rosid View MSA
123737411 5271 Pentapetalae View MSA
122792258 5272 Eudicot View MSA
122047591 5273 Angiosperm View MSA
121344626 5274 Embryophyte View MSA
123425216 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.929        
cufflinks 4.91        
cufflinks 2.943       Low
cufflinks 5.295       High
cufflinks 3.184       Low
cufflinks 4.672        

0 Strain