Gene : AT3G43220 A. thaliana TAIR10
Defline:  (1 of 4) PTHR11200//PTHR11200:SF122 - INOSITOL 5-PHOSPHATASE // PHOSPHOINOSITIDE PHOSPHATASE SAC3-RELATED Genomic Order:  3306
Name:  ? AT3G43220 Secondary Identifier:  ? PAC:19659586
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G43220 0.5kb upstream 0.5kb upstream 6700 true Chr3: 15196863-15203562 Arabidopsis thaliana
AT3G43220 0.5kb upstream 0.5kb upstream 500 false Chr3: 15203063-15203562 Arabidopsis thaliana
AT3G43220 0.5kb downstream 0.5kb downstream 6700 true Chr3: 15196363-15203062 Arabidopsis thaliana
AT3G43220 0.5kb downstream 0.5kb downstream 500 false Chr3: 15196363-15196862 Arabidopsis thaliana
AT3G43220 1.0kb upstream 1.0kb upstream 7200 true Chr3: 15196863-15204062 Arabidopsis thaliana
AT3G43220 1.0kb upstream 1.0kb upstream 1000 false Chr3: 15203063-15204062 Arabidopsis thaliana
AT3G43220 1.0kb downstream 1.0kb downstream 7200 true Chr3: 15195863-15203062 Arabidopsis thaliana
AT3G43220 1.0kb downstream 1.0kb downstream 1000 false Chr3: 15195863-15196862 Arabidopsis thaliana
AT3G43220 2.0kb upstream 2.0kb upstream 8200 true Chr3: 15196863-15205062 Arabidopsis thaliana
AT3G43220 2.0kb upstream 2.0kb upstream 2000 false Chr3: 15203063-15205062 Arabidopsis thaliana
AT3G43220 2.0kb downstream 2.0kb downstream 8200 true Chr3: 15194863-15203062 Arabidopsis thaliana
AT3G43220 2.0kb downstream 2.0kb downstream 2000 false Chr3: 15194863-15196862 Arabidopsis thaliana
AT3G43220 5.0kb upstream 5.0kb upstream 11200 true Chr3: 15196863-15208062 Arabidopsis thaliana
AT3G43220 5.0kb upstream 5.0kb upstream 5000 false Chr3: 15203063-15208062 Arabidopsis thaliana
AT3G43220 5.0kb downstream 5.0kb downstream 11200 true Chr3: 15191863-15203062 Arabidopsis thaliana
AT3G43220 5.0kb downstream 5.0kb downstream 5000 false Chr3: 15191863-15196862 Arabidopsis thaliana
AT3G43220 10.0kb upstream 10.0kb upstream 16200 true Chr3: 15196863-15213062 Arabidopsis thaliana
AT3G43220 10.0kb upstream 10.0kb upstream 10000 false Chr3: 15203063-15213062 Arabidopsis thaliana
AT3G43220 10.0kb downstream 10.0kb downstream 16200 true Chr3: 15186863-15203062 Arabidopsis thaliana
AT3G43220 10.0kb downstream 10.0kb downstream 10000 false Chr3: 15186863-15196862 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041370 5273 Angiosperm View MSA
122380115 5261 Brassicaceae View MSA
123840697 5264 Brassicales-Malvales View MSA
124342228 5266 SBM View MSA
124248342 5268 Malvidae View MSA
124066536 5270 Rosid View MSA
123750284 5271 Pentapetalae View MSA
122786503 5272 Eudicot View MSA
121350498 5274 Embryophyte View MSA
123428410 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.488        
cufflinks 5.87        
cufflinks 4.324       Low
cufflinks 6.363       High
cufflinks 4.986        
cufflinks 6.163        

0 Strain