Gene : AT3G25790 A. thaliana TAIR10
Defline:  (1 of 4) PTHR31003:SF4 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K13N2-RELATED Genomic Order:  2711
Name:  ? AT3G25790 Secondary Identifier:  ? PAC:19661495
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G25790 0.5kb upstream 0.5kb upstream 2377 true Chr3: 9412627-9415003 Arabidopsis thaliana
AT3G25790 0.5kb upstream 0.5kb upstream 500 false Chr3: 9412627-9413126 Arabidopsis thaliana
AT3G25790 0.5kb downstream 0.5kb downstream 2377 true Chr3: 9413127-9415503 Arabidopsis thaliana
AT3G25790 0.5kb downstream 0.5kb downstream 500 false Chr3: 9415004-9415503 Arabidopsis thaliana
AT3G25790 1.0kb upstream 1.0kb upstream 2877 true Chr3: 9412127-9415003 Arabidopsis thaliana
AT3G25790 1.0kb upstream 1.0kb upstream 1000 false Chr3: 9412127-9413126 Arabidopsis thaliana
AT3G25790 1.0kb downstream 1.0kb downstream 2877 true Chr3: 9413127-9416003 Arabidopsis thaliana
AT3G25790 1.0kb downstream 1.0kb downstream 1000 false Chr3: 9415004-9416003 Arabidopsis thaliana
AT3G25790 2.0kb upstream 2.0kb upstream 3877 true Chr3: 9411127-9415003 Arabidopsis thaliana
AT3G25790 2.0kb upstream 2.0kb upstream 2000 false Chr3: 9411127-9413126 Arabidopsis thaliana
AT3G25790 2.0kb downstream 2.0kb downstream 3877 true Chr3: 9413127-9417003 Arabidopsis thaliana
AT3G25790 2.0kb downstream 2.0kb downstream 2000 false Chr3: 9415004-9417003 Arabidopsis thaliana
AT3G25790 5.0kb upstream 5.0kb upstream 6877 true Chr3: 9408127-9415003 Arabidopsis thaliana
AT3G25790 5.0kb upstream 5.0kb upstream 5000 false Chr3: 9408127-9413126 Arabidopsis thaliana
AT3G25790 5.0kb downstream 5.0kb downstream 6877 true Chr3: 9413127-9420003 Arabidopsis thaliana
AT3G25790 5.0kb downstream 5.0kb downstream 5000 false Chr3: 9415004-9420003 Arabidopsis thaliana
AT3G25790 10.0kb upstream 10.0kb upstream 11877 true Chr3: 9403127-9415003 Arabidopsis thaliana
AT3G25790 10.0kb upstream 10.0kb upstream 10000 false Chr3: 9403127-9413126 Arabidopsis thaliana
AT3G25790 10.0kb downstream 10.0kb downstream 11877 true Chr3: 9413127-9425003 Arabidopsis thaliana
AT3G25790 10.0kb downstream 10.0kb downstream 10000 false Chr3: 9415004-9425003 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365575 5261 Brassicaceae View MSA
123798983 5264 Brassicales-Malvales View MSA
124296554 5266 SBM View MSA
124250696 5268 Malvidae View MSA
124062627 5270 Rosid View MSA
123739089 5271 Pentapetalae View MSA
122790332 5272 Eudicot View MSA
122043358 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.085        

0 Strain