Gene : NIP7;1 A. thaliana TAIR10
Primary Identifier:  ? AT3G06100 Defline:  (1 of 1) PTHR19139//PTHR19139:SF171 - AQUAPORIN TRANSPORTER // AQUAPORIN NIP7-1-RELATED
Genomic Order:  584 Name:  ? AT3G06100
Secondary Identifier:  ? PAC:19663868
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G06100 0.5kb upstream 0.5kb upstream 2423 true Chr3: 1841171-1843593 Arabidopsis thaliana
AT3G06100 0.5kb upstream 0.5kb upstream 500 false Chr3: 1843094-1843593 Arabidopsis thaliana
AT3G06100 0.5kb downstream 0.5kb downstream 2423 true Chr3: 1840671-1843093 Arabidopsis thaliana
AT3G06100 0.5kb downstream 0.5kb downstream 500 false Chr3: 1840671-1841170 Arabidopsis thaliana
AT3G06100 1.0kb upstream 1.0kb upstream 2923 true Chr3: 1841171-1844093 Arabidopsis thaliana
AT3G06100 1.0kb upstream 1.0kb upstream 1000 false Chr3: 1843094-1844093 Arabidopsis thaliana
AT3G06100 1.0kb downstream 1.0kb downstream 2923 true Chr3: 1840171-1843093 Arabidopsis thaliana
AT3G06100 1.0kb downstream 1.0kb downstream 1000 false Chr3: 1840171-1841170 Arabidopsis thaliana
AT3G06100 2.0kb upstream 2.0kb upstream 3923 true Chr3: 1841171-1845093 Arabidopsis thaliana
AT3G06100 2.0kb upstream 2.0kb upstream 2000 false Chr3: 1843094-1845093 Arabidopsis thaliana
AT3G06100 2.0kb downstream 2.0kb downstream 3923 true Chr3: 1839171-1843093 Arabidopsis thaliana
AT3G06100 2.0kb downstream 2.0kb downstream 2000 false Chr3: 1839171-1841170 Arabidopsis thaliana
AT3G06100 5.0kb upstream 5.0kb upstream 6923 true Chr3: 1841171-1848093 Arabidopsis thaliana
AT3G06100 5.0kb upstream 5.0kb upstream 5000 false Chr3: 1843094-1848093 Arabidopsis thaliana
AT3G06100 5.0kb downstream 5.0kb downstream 6923 true Chr3: 1836171-1843093 Arabidopsis thaliana
AT3G06100 5.0kb downstream 5.0kb downstream 5000 false Chr3: 1836171-1841170 Arabidopsis thaliana
AT3G06100 10.0kb upstream 10.0kb upstream 11923 true Chr3: 1841171-1853093 Arabidopsis thaliana
AT3G06100 10.0kb upstream 10.0kb upstream 10000 false Chr3: 1843094-1853093 Arabidopsis thaliana
AT3G06100 10.0kb downstream 10.0kb downstream 11923 true Chr3: 1831171-1843093 Arabidopsis thaliana
AT3G06100 10.0kb downstream 10.0kb downstream 10000 false Chr3: 1831171-1841170 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360708 5261 Brassicaceae View MSA
123832048 5264 Brassicales-Malvales View MSA
124342033 5266 SBM View MSA
124241511 5268 Malvidae View MSA
124062086 5270 Rosid View MSA
123736880 5271 Pentapetalae View MSA
122786837 5272 Eudicot View MSA
122042467 5273 Angiosperm View MSA
121309970 5274 Embryophyte View MSA
123427856 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.166     Low  
cufflinks 0.175     Low  
cufflinks 0.391       High
cufflinks 0.104     Low Low
cufflinks 0.292        
cufflinks 0.153     Low  

0 Strain