Gene : PLSP1 A. thaliana TAIR10
Primary Identifier:  ? AT3G24590 Defline:  (1 of 1) PTHR12383:SF25 - CHLOROPLAST PROCESSING PEPTIDASE
Genomic Order:  2593 Name:  ? AT3G24590
Secondary Identifier:  ? PAC:19661407
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G24590 0.5kb upstream 0.5kb upstream 1997 true Chr3: 8970172-8972168 Arabidopsis thaliana
AT3G24590 0.5kb upstream 0.5kb upstream 500 false Chr3: 8970172-8970671 Arabidopsis thaliana
AT3G24590 0.5kb downstream 0.5kb downstream 1997 true Chr3: 8970672-8972668 Arabidopsis thaliana
AT3G24590 0.5kb downstream 0.5kb downstream 500 false Chr3: 8972169-8972668 Arabidopsis thaliana
AT3G24590 1.0kb upstream 1.0kb upstream 2497 true Chr3: 8969672-8972168 Arabidopsis thaliana
AT3G24590 1.0kb upstream 1.0kb upstream 1000 false Chr3: 8969672-8970671 Arabidopsis thaliana
AT3G24590 1.0kb downstream 1.0kb downstream 2497 true Chr3: 8970672-8973168 Arabidopsis thaliana
AT3G24590 1.0kb downstream 1.0kb downstream 1000 false Chr3: 8972169-8973168 Arabidopsis thaliana
AT3G24590 2.0kb upstream 2.0kb upstream 3497 true Chr3: 8968672-8972168 Arabidopsis thaliana
AT3G24590 2.0kb upstream 2.0kb upstream 2000 false Chr3: 8968672-8970671 Arabidopsis thaliana
AT3G24590 2.0kb downstream 2.0kb downstream 3497 true Chr3: 8970672-8974168 Arabidopsis thaliana
AT3G24590 2.0kb downstream 2.0kb downstream 2000 false Chr3: 8972169-8974168 Arabidopsis thaliana
AT3G24590 5.0kb upstream 5.0kb upstream 6497 true Chr3: 8965672-8972168 Arabidopsis thaliana
AT3G24590 5.0kb upstream 5.0kb upstream 5000 false Chr3: 8965672-8970671 Arabidopsis thaliana
AT3G24590 5.0kb downstream 5.0kb downstream 6497 true Chr3: 8970672-8977168 Arabidopsis thaliana
AT3G24590 5.0kb downstream 5.0kb downstream 5000 false Chr3: 8972169-8977168 Arabidopsis thaliana
AT3G24590 10.0kb upstream 10.0kb upstream 11497 true Chr3: 8960672-8972168 Arabidopsis thaliana
AT3G24590 10.0kb upstream 10.0kb upstream 10000 false Chr3: 8960672-8970671 Arabidopsis thaliana
AT3G24590 10.0kb downstream 10.0kb downstream 11497 true Chr3: 8970672-8982168 Arabidopsis thaliana
AT3G24590 10.0kb downstream 10.0kb downstream 10000 false Chr3: 8972169-8982168 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365027 5261 Brassicaceae View MSA
123831316 5264 Brassicales-Malvales View MSA
124339449 5266 SBM View MSA
124237665 5268 Malvidae View MSA
124065256 5270 Rosid View MSA
123738453 5271 Pentapetalae View MSA
122788356 5272 Eudicot View MSA
122044516 5273 Angiosperm View MSA
123428894 5275 Viridiplantae View MSA
121348818 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.917     High High
cufflinks 5.746        
cufflinks 32.36     High  
cufflinks 6.302        
cufflinks 25.53     High  
cufflinks 5.571        

0 Strain