Gene : AT3G12930 A. thaliana TAIR10
Defline:  (1 of 1) PTHR21043:SF1 - PROTEIN IOJAP, CHLOROPLASTIC Genomic Order:  1277
Name:  ? AT3G12930 Secondary Identifier:  ? PAC:19664803
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G12930 0.5kb upstream 0.5kb upstream 2050 true Chr3: 4127907-4129956 Arabidopsis thaliana
AT3G12930 0.5kb upstream 0.5kb upstream 500 false Chr3: 4127907-4128406 Arabidopsis thaliana
AT3G12930 0.5kb downstream 0.5kb downstream 2050 true Chr3: 4128407-4130456 Arabidopsis thaliana
AT3G12930 0.5kb downstream 0.5kb downstream 500 false Chr3: 4129957-4130456 Arabidopsis thaliana
AT3G12930 1.0kb upstream 1.0kb upstream 2550 true Chr3: 4127407-4129956 Arabidopsis thaliana
AT3G12930 1.0kb upstream 1.0kb upstream 1000 false Chr3: 4127407-4128406 Arabidopsis thaliana
AT3G12930 1.0kb downstream 1.0kb downstream 2550 true Chr3: 4128407-4130956 Arabidopsis thaliana
AT3G12930 1.0kb downstream 1.0kb downstream 1000 false Chr3: 4129957-4130956 Arabidopsis thaliana
AT3G12930 2.0kb upstream 2.0kb upstream 3550 true Chr3: 4126407-4129956 Arabidopsis thaliana
AT3G12930 2.0kb upstream 2.0kb upstream 2000 false Chr3: 4126407-4128406 Arabidopsis thaliana
AT3G12930 2.0kb downstream 2.0kb downstream 3550 true Chr3: 4128407-4131956 Arabidopsis thaliana
AT3G12930 2.0kb downstream 2.0kb downstream 2000 false Chr3: 4129957-4131956 Arabidopsis thaliana
AT3G12930 5.0kb upstream 5.0kb upstream 6550 true Chr3: 4123407-4129956 Arabidopsis thaliana
AT3G12930 5.0kb upstream 5.0kb upstream 5000 false Chr3: 4123407-4128406 Arabidopsis thaliana
AT3G12930 5.0kb downstream 5.0kb downstream 6550 true Chr3: 4128407-4134956 Arabidopsis thaliana
AT3G12930 5.0kb downstream 5.0kb downstream 5000 false Chr3: 4129957-4134956 Arabidopsis thaliana
AT3G12930 10.0kb upstream 10.0kb upstream 11550 true Chr3: 4118407-4129956 Arabidopsis thaliana
AT3G12930 10.0kb upstream 10.0kb upstream 10000 false Chr3: 4118407-4128406 Arabidopsis thaliana
AT3G12930 10.0kb downstream 10.0kb downstream 11550 true Chr3: 4128407-4139956 Arabidopsis thaliana
AT3G12930 10.0kb downstream 10.0kb downstream 10000 false Chr3: 4129957-4139956 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363842 5261 Brassicaceae View MSA
123840233 5264 Brassicales-Malvales View MSA
124344266 5266 SBM View MSA
124238972 5268 Malvidae View MSA
124067704 5270 Rosid View MSA
123743843 5271 Pentapetalae View MSA
122785584 5272 Eudicot View MSA
122043136 5273 Angiosperm View MSA
121343948 5274 Embryophyte View MSA
123426763 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.017     High  
cufflinks 4.724        
cufflinks 41.548     High High
cufflinks 4.545        
cufflinks 27.124     High  
cufflinks 4.339        

0 Strain