Gene : PIE1 A. thaliana TAIR10
Primary Identifier:  ? AT3G12810 Defline:  (1 of 1) K11320 - E1A-binding protein p400 [EC:3.6.4.-] (EP400)
Genomic Order:  1263 Name:  ? AT3G12810
Secondary Identifier:  ? PAC:19660244
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G12810 0.5kb upstream 0.5kb upstream 9537 true Chr3: 4064542-4074078 Arabidopsis thaliana
AT3G12810 0.5kb upstream 0.5kb upstream 500 false Chr3: 4064542-4065041 Arabidopsis thaliana
AT3G12810 0.5kb downstream 0.5kb downstream 9537 true Chr3: 4065042-4074578 Arabidopsis thaliana
AT3G12810 0.5kb downstream 0.5kb downstream 500 false Chr3: 4074079-4074578 Arabidopsis thaliana
AT3G12810 1.0kb upstream 1.0kb upstream 10037 true Chr3: 4064042-4074078 Arabidopsis thaliana
AT3G12810 1.0kb upstream 1.0kb upstream 1000 false Chr3: 4064042-4065041 Arabidopsis thaliana
AT3G12810 1.0kb downstream 1.0kb downstream 10037 true Chr3: 4065042-4075078 Arabidopsis thaliana
AT3G12810 1.0kb downstream 1.0kb downstream 1000 false Chr3: 4074079-4075078 Arabidopsis thaliana
AT3G12810 2.0kb upstream 2.0kb upstream 11037 true Chr3: 4063042-4074078 Arabidopsis thaliana
AT3G12810 2.0kb upstream 2.0kb upstream 2000 false Chr3: 4063042-4065041 Arabidopsis thaliana
AT3G12810 2.0kb downstream 2.0kb downstream 11037 true Chr3: 4065042-4076078 Arabidopsis thaliana
AT3G12810 2.0kb downstream 2.0kb downstream 2000 false Chr3: 4074079-4076078 Arabidopsis thaliana
AT3G12810 5.0kb upstream 5.0kb upstream 14037 true Chr3: 4060042-4074078 Arabidopsis thaliana
AT3G12810 5.0kb upstream 5.0kb upstream 5000 false Chr3: 4060042-4065041 Arabidopsis thaliana
AT3G12810 5.0kb downstream 5.0kb downstream 14037 true Chr3: 4065042-4079078 Arabidopsis thaliana
AT3G12810 5.0kb downstream 5.0kb downstream 5000 false Chr3: 4074079-4079078 Arabidopsis thaliana
AT3G12810 10.0kb upstream 10.0kb upstream 19037 true Chr3: 4055042-4074078 Arabidopsis thaliana
AT3G12810 10.0kb upstream 10.0kb upstream 10000 false Chr3: 4055042-4065041 Arabidopsis thaliana
AT3G12810 10.0kb downstream 10.0kb downstream 19037 true Chr3: 4065042-4084078 Arabidopsis thaliana
AT3G12810 10.0kb downstream 10.0kb downstream 10000 false Chr3: 4074079-4084078 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365367 5261 Brassicaceae View MSA
123828660 5264 Brassicales-Malvales View MSA
124344279 5266 SBM View MSA
124246251 5268 Malvidae View MSA
124061293 5270 Rosid View MSA
123739512 5271 Pentapetalae View MSA
122790205 5272 Eudicot View MSA
122045682 5273 Angiosperm View MSA
121347848 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.961       Low
cufflinks 9.046        
cufflinks 6.415        
cufflinks 9.135       High
cufflinks 7.308        
cufflinks 8.436        

0 Strain