Gene : AT3G12910 A. thaliana TAIR10
Defline:  (1 of 1) PTHR31719//PTHR31719:SF42 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MGH6 Genomic Order:  1274
Name:  ? AT3G12910 Secondary Identifier:  ? PAC:19658673
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G12910 0.5kb upstream 0.5kb upstream 1774 true Chr3: 4108875-4110648 Arabidopsis thaliana
AT3G12910 0.5kb upstream 0.5kb upstream 500 false Chr3: 4108875-4109374 Arabidopsis thaliana
AT3G12910 0.5kb downstream 0.5kb downstream 1774 true Chr3: 4109375-4111148 Arabidopsis thaliana
AT3G12910 0.5kb downstream 0.5kb downstream 500 false Chr3: 4110649-4111148 Arabidopsis thaliana
AT3G12910 1.0kb upstream 1.0kb upstream 2274 true Chr3: 4108375-4110648 Arabidopsis thaliana
AT3G12910 1.0kb upstream 1.0kb upstream 1000 false Chr3: 4108375-4109374 Arabidopsis thaliana
AT3G12910 1.0kb downstream 1.0kb downstream 2274 true Chr3: 4109375-4111648 Arabidopsis thaliana
AT3G12910 1.0kb downstream 1.0kb downstream 1000 false Chr3: 4110649-4111648 Arabidopsis thaliana
AT3G12910 2.0kb upstream 2.0kb upstream 3274 true Chr3: 4107375-4110648 Arabidopsis thaliana
AT3G12910 2.0kb upstream 2.0kb upstream 2000 false Chr3: 4107375-4109374 Arabidopsis thaliana
AT3G12910 2.0kb downstream 2.0kb downstream 3274 true Chr3: 4109375-4112648 Arabidopsis thaliana
AT3G12910 2.0kb downstream 2.0kb downstream 2000 false Chr3: 4110649-4112648 Arabidopsis thaliana
AT3G12910 5.0kb upstream 5.0kb upstream 6274 true Chr3: 4104375-4110648 Arabidopsis thaliana
AT3G12910 5.0kb upstream 5.0kb upstream 5000 false Chr3: 4104375-4109374 Arabidopsis thaliana
AT3G12910 5.0kb downstream 5.0kb downstream 6274 true Chr3: 4109375-4115648 Arabidopsis thaliana
AT3G12910 5.0kb downstream 5.0kb downstream 5000 false Chr3: 4110649-4115648 Arabidopsis thaliana
AT3G12910 10.0kb upstream 10.0kb upstream 11274 true Chr3: 4099375-4110648 Arabidopsis thaliana
AT3G12910 10.0kb upstream 10.0kb upstream 10000 false Chr3: 4099375-4109374 Arabidopsis thaliana
AT3G12910 10.0kb downstream 10.0kb downstream 11274 true Chr3: 4109375-4120648 Arabidopsis thaliana
AT3G12910 10.0kb downstream 10.0kb downstream 10000 false Chr3: 4110649-4120648 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041469 5273 Angiosperm View MSA
122367170 5261 Brassicaceae View MSA
123835336 5264 Brassicales-Malvales View MSA
124337604 5266 SBM View MSA
124248038 5268 Malvidae View MSA
124071210 5270 Rosid View MSA
123741758 5271 Pentapetalae View MSA
122786697 5272 Eudicot View MSA
121309853 5274 Embryophyte View MSA
123347498 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.125       High
cufflinks 0.38        
cufflinks 0.26     Low  
cufflinks 0.461        
cufflinks 0.904        
cufflinks 0.125     Low Low

0 Strain