Gene : AT3G20395 A. thaliana TAIR10
Defline:  (1 of 1) PTHR14155//PTHR14155:SF188 - RING FINGER DOMAIN-CONTAINING // RING-FINGER DOMAIN-CONTAINING PROTEIN Genomic Order:  2120
Name:  ? AT3G20395 Secondary Identifier:  ? PAC:19661788
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G20395 0.5kb upstream 0.5kb upstream 2423 true Chr3: 7111948-7114370 Arabidopsis thaliana
AT3G20395 0.5kb upstream 0.5kb upstream 500 false Chr3: 7113871-7114370 Arabidopsis thaliana
AT3G20395 0.5kb downstream 0.5kb downstream 2423 true Chr3: 7111448-7113870 Arabidopsis thaliana
AT3G20395 0.5kb downstream 0.5kb downstream 500 false Chr3: 7111448-7111947 Arabidopsis thaliana
AT3G20395 1.0kb upstream 1.0kb upstream 2923 true Chr3: 7111948-7114870 Arabidopsis thaliana
AT3G20395 1.0kb upstream 1.0kb upstream 1000 false Chr3: 7113871-7114870 Arabidopsis thaliana
AT3G20395 1.0kb downstream 1.0kb downstream 2923 true Chr3: 7110948-7113870 Arabidopsis thaliana
AT3G20395 1.0kb downstream 1.0kb downstream 1000 false Chr3: 7110948-7111947 Arabidopsis thaliana
AT3G20395 2.0kb upstream 2.0kb upstream 3923 true Chr3: 7111948-7115870 Arabidopsis thaliana
AT3G20395 2.0kb upstream 2.0kb upstream 2000 false Chr3: 7113871-7115870 Arabidopsis thaliana
AT3G20395 2.0kb downstream 2.0kb downstream 3923 true Chr3: 7109948-7113870 Arabidopsis thaliana
AT3G20395 2.0kb downstream 2.0kb downstream 2000 false Chr3: 7109948-7111947 Arabidopsis thaliana
AT3G20395 5.0kb upstream 5.0kb upstream 6923 true Chr3: 7111948-7118870 Arabidopsis thaliana
AT3G20395 5.0kb upstream 5.0kb upstream 5000 false Chr3: 7113871-7118870 Arabidopsis thaliana
AT3G20395 5.0kb downstream 5.0kb downstream 6923 true Chr3: 7106948-7113870 Arabidopsis thaliana
AT3G20395 5.0kb downstream 5.0kb downstream 5000 false Chr3: 7106948-7111947 Arabidopsis thaliana
AT3G20395 10.0kb upstream 10.0kb upstream 11923 true Chr3: 7111948-7123870 Arabidopsis thaliana
AT3G20395 10.0kb upstream 10.0kb upstream 10000 false Chr3: 7113871-7123870 Arabidopsis thaliana
AT3G20395 10.0kb downstream 10.0kb downstream 11923 true Chr3: 7101948-7113870 Arabidopsis thaliana
AT3G20395 10.0kb downstream 10.0kb downstream 10000 false Chr3: 7101948-7111947 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791916 5273 Angiosperm View MSA
122367102 5261 Brassicaceae View MSA
123831138 5264 Brassicales-Malvales View MSA
124337586 5266 SBM View MSA
124253026 5268 Malvidae View MSA
124064654 5270 Rosid View MSA
123747465 5271 Pentapetalae View MSA
122795286 5272 Eudicot View MSA
123429130 5275 Viridiplantae View MSA
121063185 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.067     Low  
cufflinks 0.048     Low  
cufflinks 0.213     Low High
cufflinks 0.077     Low  
cufflinks 0.154     Low  
cufflinks 0.008     Low Low

0 Strain