Gene : MUB4 A. thaliana TAIR10
Primary Identifier:  ? AT3G26980 Defline:  (1 of 1) PTHR13169//PTHR13169:SF1 - UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN // SUBFAMILY NOT NAMED
Genomic Order:  2850 Name:  ? AT3G26980
Secondary Identifier:  ? PAC:19661777
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G26980 0.5kb upstream 0.5kb upstream 2375 true Chr3: 9946166-9948540 Arabidopsis thaliana
AT3G26980 0.5kb upstream 0.5kb upstream 500 false Chr3: 9948041-9948540 Arabidopsis thaliana
AT3G26980 0.5kb downstream 0.5kb downstream 2375 true Chr3: 9945666-9948040 Arabidopsis thaliana
AT3G26980 0.5kb downstream 0.5kb downstream 500 false Chr3: 9945666-9946165 Arabidopsis thaliana
AT3G26980 1.0kb upstream 1.0kb upstream 2875 true Chr3: 9946166-9949040 Arabidopsis thaliana
AT3G26980 1.0kb upstream 1.0kb upstream 1000 false Chr3: 9948041-9949040 Arabidopsis thaliana
AT3G26980 1.0kb downstream 1.0kb downstream 2875 true Chr3: 9945166-9948040 Arabidopsis thaliana
AT3G26980 1.0kb downstream 1.0kb downstream 1000 false Chr3: 9945166-9946165 Arabidopsis thaliana
AT3G26980 2.0kb upstream 2.0kb upstream 3875 true Chr3: 9946166-9950040 Arabidopsis thaliana
AT3G26980 2.0kb upstream 2.0kb upstream 2000 false Chr3: 9948041-9950040 Arabidopsis thaliana
AT3G26980 2.0kb downstream 2.0kb downstream 3875 true Chr3: 9944166-9948040 Arabidopsis thaliana
AT3G26980 2.0kb downstream 2.0kb downstream 2000 false Chr3: 9944166-9946165 Arabidopsis thaliana
AT3G26980 5.0kb upstream 5.0kb upstream 6875 true Chr3: 9946166-9953040 Arabidopsis thaliana
AT3G26980 5.0kb upstream 5.0kb upstream 5000 false Chr3: 9948041-9953040 Arabidopsis thaliana
AT3G26980 5.0kb downstream 5.0kb downstream 6875 true Chr3: 9941166-9948040 Arabidopsis thaliana
AT3G26980 5.0kb downstream 5.0kb downstream 5000 false Chr3: 9941166-9946165 Arabidopsis thaliana
AT3G26980 10.0kb upstream 10.0kb upstream 11875 true Chr3: 9946166-9958040 Arabidopsis thaliana
AT3G26980 10.0kb upstream 10.0kb upstream 10000 false Chr3: 9948041-9958040 Arabidopsis thaliana
AT3G26980 10.0kb downstream 10.0kb downstream 11875 true Chr3: 9936166-9948040 Arabidopsis thaliana
AT3G26980 10.0kb downstream 10.0kb downstream 10000 false Chr3: 9936166-9946165 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378779 5261 Brassicaceae View MSA
123836115 5264 Brassicales-Malvales View MSA
124341541 5266 SBM View MSA
124248772 5268 Malvidae View MSA
124067947 5270 Rosid View MSA
123739636 5271 Pentapetalae View MSA
122787599 5272 Eudicot View MSA
122050739 5273 Angiosperm View MSA
121344338 5274 Embryophyte View MSA
123427741 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.902     High  
cufflinks 106.825     High High
cufflinks 18.851       Low
cufflinks 66.92     High  
cufflinks 16.863       Low
cufflinks 90.035     High  

0 Strain