Gene : MAD2 A. thaliana TAIR10
Primary Identifier:  ? AT3G25980 Defline:  (1 of 1) K02537 - mitotic spindle assembly checkpoint protein MAD2 (MAD2)
Genomic Order:  2734 Name:  ? AT3G25980
Secondary Identifier:  ? PAC:19664655
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G25980 0.5kb upstream 0.5kb upstream 2125 true Chr3: 9502556-9504680 Arabidopsis thaliana
AT3G25980 0.5kb upstream 0.5kb upstream 500 false Chr3: 9502556-9503055 Arabidopsis thaliana
AT3G25980 0.5kb downstream 0.5kb downstream 2125 true Chr3: 9503056-9505180 Arabidopsis thaliana
AT3G25980 0.5kb downstream 0.5kb downstream 500 false Chr3: 9504681-9505180 Arabidopsis thaliana
AT3G25980 1.0kb upstream 1.0kb upstream 2625 true Chr3: 9502056-9504680 Arabidopsis thaliana
AT3G25980 1.0kb upstream 1.0kb upstream 1000 false Chr3: 9502056-9503055 Arabidopsis thaliana
AT3G25980 1.0kb downstream 1.0kb downstream 2625 true Chr3: 9503056-9505680 Arabidopsis thaliana
AT3G25980 1.0kb downstream 1.0kb downstream 1000 false Chr3: 9504681-9505680 Arabidopsis thaliana
AT3G25980 2.0kb upstream 2.0kb upstream 3625 true Chr3: 9501056-9504680 Arabidopsis thaliana
AT3G25980 2.0kb upstream 2.0kb upstream 2000 false Chr3: 9501056-9503055 Arabidopsis thaliana
AT3G25980 2.0kb downstream 2.0kb downstream 3625 true Chr3: 9503056-9506680 Arabidopsis thaliana
AT3G25980 2.0kb downstream 2.0kb downstream 2000 false Chr3: 9504681-9506680 Arabidopsis thaliana
AT3G25980 5.0kb upstream 5.0kb upstream 6625 true Chr3: 9498056-9504680 Arabidopsis thaliana
AT3G25980 5.0kb upstream 5.0kb upstream 5000 false Chr3: 9498056-9503055 Arabidopsis thaliana
AT3G25980 5.0kb downstream 5.0kb downstream 6625 true Chr3: 9503056-9509680 Arabidopsis thaliana
AT3G25980 5.0kb downstream 5.0kb downstream 5000 false Chr3: 9504681-9509680 Arabidopsis thaliana
AT3G25980 10.0kb upstream 10.0kb upstream 11625 true Chr3: 9493056-9504680 Arabidopsis thaliana
AT3G25980 10.0kb upstream 10.0kb upstream 10000 false Chr3: 9493056-9503055 Arabidopsis thaliana
AT3G25980 10.0kb downstream 10.0kb downstream 11625 true Chr3: 9503056-9514680 Arabidopsis thaliana
AT3G25980 10.0kb downstream 10.0kb downstream 10000 false Chr3: 9504681-9514680 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363613 5261 Brassicaceae View MSA
123830938 5264 Brassicales-Malvales View MSA
124340980 5266 SBM View MSA
124241973 5268 Malvidae View MSA
124063049 5270 Rosid View MSA
123747176 5271 Pentapetalae View MSA
122787361 5272 Eudicot View MSA
122047880 5273 Angiosperm View MSA
121344125 5274 Embryophyte View MSA
123424567 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.941        
cufflinks 10.272        
cufflinks 1.646        
cufflinks 9.377        
cufflinks 1.14       Low
cufflinks 15.284       High

0 Strain