Gene : AT3G25640 A. thaliana TAIR10
Defline:  (1 of 12) PF04759 - Protein of unknown function, DUF617 (DUF617) Genomic Order:  2691
Name:  ? AT3G25640 Secondary Identifier:  ? PAC:19660420
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G25640 0.5kb upstream 0.5kb upstream 1586 true Chr3: 9333219-9334804 Arabidopsis thaliana
AT3G25640 0.5kb upstream 0.5kb upstream 500 false Chr3: 9333219-9333718 Arabidopsis thaliana
AT3G25640 0.5kb downstream 0.5kb downstream 1586 true Chr3: 9333719-9335304 Arabidopsis thaliana
AT3G25640 0.5kb downstream 0.5kb downstream 500 false Chr3: 9334805-9335304 Arabidopsis thaliana
AT3G25640 1.0kb upstream 1.0kb upstream 2086 true Chr3: 9332719-9334804 Arabidopsis thaliana
AT3G25640 1.0kb upstream 1.0kb upstream 1000 false Chr3: 9332719-9333718 Arabidopsis thaliana
AT3G25640 1.0kb downstream 1.0kb downstream 2086 true Chr3: 9333719-9335804 Arabidopsis thaliana
AT3G25640 1.0kb downstream 1.0kb downstream 1000 false Chr3: 9334805-9335804 Arabidopsis thaliana
AT3G25640 2.0kb upstream 2.0kb upstream 3086 true Chr3: 9331719-9334804 Arabidopsis thaliana
AT3G25640 2.0kb upstream 2.0kb upstream 2000 false Chr3: 9331719-9333718 Arabidopsis thaliana
AT3G25640 2.0kb downstream 2.0kb downstream 3086 true Chr3: 9333719-9336804 Arabidopsis thaliana
AT3G25640 2.0kb downstream 2.0kb downstream 2000 false Chr3: 9334805-9336804 Arabidopsis thaliana
AT3G25640 5.0kb upstream 5.0kb upstream 6086 true Chr3: 9328719-9334804 Arabidopsis thaliana
AT3G25640 5.0kb upstream 5.0kb upstream 5000 false Chr3: 9328719-9333718 Arabidopsis thaliana
AT3G25640 5.0kb downstream 5.0kb downstream 6086 true Chr3: 9333719-9339804 Arabidopsis thaliana
AT3G25640 5.0kb downstream 5.0kb downstream 5000 false Chr3: 9334805-9339804 Arabidopsis thaliana
AT3G25640 10.0kb upstream 10.0kb upstream 11086 true Chr3: 9323719-9334804 Arabidopsis thaliana
AT3G25640 10.0kb upstream 10.0kb upstream 10000 false Chr3: 9323719-9333718 Arabidopsis thaliana
AT3G25640 10.0kb downstream 10.0kb downstream 11086 true Chr3: 9333719-9344804 Arabidopsis thaliana
AT3G25640 10.0kb downstream 10.0kb downstream 10000 false Chr3: 9334805-9344804 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377709 5261 Brassicaceae View MSA
123830486 5264 Brassicales-Malvales View MSA
124342832 5266 SBM View MSA
124241670 5268 Malvidae View MSA
124064247 5270 Rosid View MSA
123749266 5271 Pentapetalae View MSA
122791238 5272 Eudicot View MSA
122050120 5273 Angiosperm View MSA
121349765 5274 Embryophyte View MSA
123381434 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.579        
cufflinks 16.701        
cufflinks 0.41       Low
cufflinks 22.394       High
cufflinks 0.712        
cufflinks 15.079        

0 Strain