Gene : AT3G25290 A. thaliana TAIR10
Defline:  (1 of 2) PTHR23130//PTHR23130:SF95 - FAMILY NOT NAMED // AUXIN-RESPONSIVE PROTEIN-RELATED Genomic Order:  2662
Name:  ? AT3G25290 Secondary Identifier:  ? PAC:19662082
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G25290 0.5kb upstream 0.5kb upstream 2163 true Chr3: 9208437-9210599 Arabidopsis thaliana
AT3G25290 0.5kb upstream 0.5kb upstream 500 false Chr3: 9208437-9208936 Arabidopsis thaliana
AT3G25290 0.5kb downstream 0.5kb downstream 2163 true Chr3: 9208937-9211099 Arabidopsis thaliana
AT3G25290 0.5kb downstream 0.5kb downstream 500 false Chr3: 9210600-9211099 Arabidopsis thaliana
AT3G25290 1.0kb upstream 1.0kb upstream 2663 true Chr3: 9207937-9210599 Arabidopsis thaliana
AT3G25290 1.0kb upstream 1.0kb upstream 1000 false Chr3: 9207937-9208936 Arabidopsis thaliana
AT3G25290 1.0kb downstream 1.0kb downstream 2663 true Chr3: 9208937-9211599 Arabidopsis thaliana
AT3G25290 1.0kb downstream 1.0kb downstream 1000 false Chr3: 9210600-9211599 Arabidopsis thaliana
AT3G25290 2.0kb upstream 2.0kb upstream 3663 true Chr3: 9206937-9210599 Arabidopsis thaliana
AT3G25290 2.0kb upstream 2.0kb upstream 2000 false Chr3: 9206937-9208936 Arabidopsis thaliana
AT3G25290 2.0kb downstream 2.0kb downstream 3663 true Chr3: 9208937-9212599 Arabidopsis thaliana
AT3G25290 2.0kb downstream 2.0kb downstream 2000 false Chr3: 9210600-9212599 Arabidopsis thaliana
AT3G25290 5.0kb upstream 5.0kb upstream 6663 true Chr3: 9203937-9210599 Arabidopsis thaliana
AT3G25290 5.0kb upstream 5.0kb upstream 5000 false Chr3: 9203937-9208936 Arabidopsis thaliana
AT3G25290 5.0kb downstream 5.0kb downstream 6663 true Chr3: 9208937-9215599 Arabidopsis thaliana
AT3G25290 5.0kb downstream 5.0kb downstream 5000 false Chr3: 9210600-9215599 Arabidopsis thaliana
AT3G25290 10.0kb upstream 10.0kb upstream 11663 true Chr3: 9198937-9210599 Arabidopsis thaliana
AT3G25290 10.0kb upstream 10.0kb upstream 10000 false Chr3: 9198937-9208936 Arabidopsis thaliana
AT3G25290 10.0kb downstream 10.0kb downstream 11663 true Chr3: 9208937-9220599 Arabidopsis thaliana
AT3G25290 10.0kb downstream 10.0kb downstream 10000 false Chr3: 9210600-9220599 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369448 5261 Brassicaceae View MSA
123838754 5264 Brassicales-Malvales View MSA
124336764 5266 SBM View MSA
124253692 5268 Malvidae View MSA
124072358 5270 Rosid View MSA
123745373 5271 Pentapetalae View MSA
122787845 5272 Eudicot View MSA
122050744 5273 Angiosperm View MSA
121348347 5274 Embryophyte View MSA
123428624 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.096        
cufflinks 33.033     High  
cufflinks 1.173       Low
cufflinks 40.714     High  
cufflinks 2.133        
cufflinks 51.235     High High

0 Strain