Gene : AFH1 A. thaliana TAIR10
Primary Identifier:  ? AT3G25500 Defline:  (1 of 4) PTHR23213//PTHR23213:SF220 - FORMIN-RELATED // SUBFAMILY NOT NAMED
Genomic Order:  2672 Name:  ? AT3G25500
Secondary Identifier:  ? PAC:19662415
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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G25500 0.5kb upstream 0.5kb upstream 4410 true Chr3: 9251093-9255502 Arabidopsis thaliana
AT3G25500 0.5kb upstream 0.5kb upstream 500 false Chr3: 9255003-9255502 Arabidopsis thaliana
AT3G25500 0.5kb downstream 0.5kb downstream 4410 true Chr3: 9250593-9255002 Arabidopsis thaliana
AT3G25500 0.5kb downstream 0.5kb downstream 500 false Chr3: 9250593-9251092 Arabidopsis thaliana
AT3G25500 1.0kb upstream 1.0kb upstream 4910 true Chr3: 9251093-9256002 Arabidopsis thaliana
AT3G25500 1.0kb upstream 1.0kb upstream 1000 false Chr3: 9255003-9256002 Arabidopsis thaliana
AT3G25500 1.0kb downstream 1.0kb downstream 4910 true Chr3: 9250093-9255002 Arabidopsis thaliana
AT3G25500 1.0kb downstream 1.0kb downstream 1000 false Chr3: 9250093-9251092 Arabidopsis thaliana
AT3G25500 2.0kb upstream 2.0kb upstream 5910 true Chr3: 9251093-9257002 Arabidopsis thaliana
AT3G25500 2.0kb upstream 2.0kb upstream 2000 false Chr3: 9255003-9257002 Arabidopsis thaliana
AT3G25500 2.0kb downstream 2.0kb downstream 5910 true Chr3: 9249093-9255002 Arabidopsis thaliana
AT3G25500 2.0kb downstream 2.0kb downstream 2000 false Chr3: 9249093-9251092 Arabidopsis thaliana
AT3G25500 5.0kb upstream 5.0kb upstream 8910 true Chr3: 9251093-9260002 Arabidopsis thaliana
AT3G25500 5.0kb upstream 5.0kb upstream 5000 false Chr3: 9255003-9260002 Arabidopsis thaliana
AT3G25500 5.0kb downstream 5.0kb downstream 8910 true Chr3: 9246093-9255002 Arabidopsis thaliana
AT3G25500 5.0kb downstream 5.0kb downstream 5000 false Chr3: 9246093-9251092 Arabidopsis thaliana
AT3G25500 10.0kb upstream 10.0kb upstream 13910 true Chr3: 9251093-9265002 Arabidopsis thaliana
AT3G25500 10.0kb upstream 10.0kb upstream 10000 false Chr3: 9255003-9265002 Arabidopsis thaliana
AT3G25500 10.0kb downstream 10.0kb downstream 13910 true Chr3: 9241093-9255002 Arabidopsis thaliana
AT3G25500 10.0kb downstream 10.0kb downstream 10000 false Chr3: 9241093-9251092 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371427 5261 Brassicaceae View MSA
123829513 5264 Brassicales-Malvales View MSA
124346555 5266 SBM View MSA
124250617 5268 Malvidae View MSA
124073350 5270 Rosid View MSA
123751322 5271 Pentapetalae View MSA
122795488 5272 Eudicot View MSA
122050252 5273 Angiosperm View MSA
121351212 5274 Embryophyte View MSA
123428124 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.596     High  
cufflinks 43.003     High  
cufflinks 16.524       Low
cufflinks 45.692     High  
cufflinks 16.612       Low
cufflinks 48.55     High  

0 Strain