Gene : RIN4 A. thaliana TAIR10
Primary Identifier:  ? AT3G25070 Defline:  (1 of 1) K13456 - RPM1-interacting protein 4 (RIN4)
Genomic Order:  2635 Name:  ? AT3G25070
Secondary Identifier:  ? PAC:19664458
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G25070 0.5kb upstream 0.5kb upstream 2221 true Chr3: 9131810-9134030 Arabidopsis thaliana
AT3G25070 0.5kb upstream 0.5kb upstream 500 false Chr3: 9131810-9132309 Arabidopsis thaliana
AT3G25070 0.5kb downstream 0.5kb downstream 2221 true Chr3: 9132310-9134530 Arabidopsis thaliana
AT3G25070 0.5kb downstream 0.5kb downstream 500 false Chr3: 9134031-9134530 Arabidopsis thaliana
AT3G25070 1.0kb upstream 1.0kb upstream 2721 true Chr3: 9131310-9134030 Arabidopsis thaliana
AT3G25070 1.0kb upstream 1.0kb upstream 1000 false Chr3: 9131310-9132309 Arabidopsis thaliana
AT3G25070 1.0kb downstream 1.0kb downstream 2721 true Chr3: 9132310-9135030 Arabidopsis thaliana
AT3G25070 1.0kb downstream 1.0kb downstream 1000 false Chr3: 9134031-9135030 Arabidopsis thaliana
AT3G25070 2.0kb upstream 2.0kb upstream 3721 true Chr3: 9130310-9134030 Arabidopsis thaliana
AT3G25070 2.0kb upstream 2.0kb upstream 2000 false Chr3: 9130310-9132309 Arabidopsis thaliana
AT3G25070 2.0kb downstream 2.0kb downstream 3721 true Chr3: 9132310-9136030 Arabidopsis thaliana
AT3G25070 2.0kb downstream 2.0kb downstream 2000 false Chr3: 9134031-9136030 Arabidopsis thaliana
AT3G25070 5.0kb upstream 5.0kb upstream 6721 true Chr3: 9127310-9134030 Arabidopsis thaliana
AT3G25070 5.0kb upstream 5.0kb upstream 5000 false Chr3: 9127310-9132309 Arabidopsis thaliana
AT3G25070 5.0kb downstream 5.0kb downstream 6721 true Chr3: 9132310-9139030 Arabidopsis thaliana
AT3G25070 5.0kb downstream 5.0kb downstream 5000 false Chr3: 9134031-9139030 Arabidopsis thaliana
AT3G25070 10.0kb upstream 10.0kb upstream 11721 true Chr3: 9122310-9134030 Arabidopsis thaliana
AT3G25070 10.0kb upstream 10.0kb upstream 10000 false Chr3: 9122310-9132309 Arabidopsis thaliana
AT3G25070 10.0kb downstream 10.0kb downstream 11721 true Chr3: 9132310-9144030 Arabidopsis thaliana
AT3G25070 10.0kb downstream 10.0kb downstream 10000 false Chr3: 9134031-9144030 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373073 5261 Brassicaceae View MSA
123840811 5264 Brassicales-Malvales View MSA
124344601 5266 SBM View MSA
124250408 5268 Malvidae View MSA
124074816 5270 Rosid View MSA
123749229 5271 Pentapetalae View MSA
122795391 5272 Eudicot View MSA
122048165 5273 Angiosperm View MSA
121344169 5274 Embryophyte View MSA
123379991 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.387     High High
cufflinks 24.9        
cufflinks 21.624        
cufflinks 23.926        
cufflinks 25.841     High  
cufflinks 15.726       Low

0 Strain