Gene : AT3G25150 A. thaliana TAIR10
Defline:  (1 of 1) PF02136//PF14259 - Nuclear transport factor 2 (NTF2) domain (NTF2) // RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) (RRM_6) Genomic Order:  2644
Name:  ? AT3G25150 Secondary Identifier:  ? PAC:19664671
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G25150 0.5kb upstream 0.5kb upstream 3644 true Chr3: 9156957-9160600 Arabidopsis thaliana
AT3G25150 0.5kb upstream 0.5kb upstream 500 false Chr3: 9160101-9160600 Arabidopsis thaliana
AT3G25150 0.5kb downstream 0.5kb downstream 3644 true Chr3: 9156457-9160100 Arabidopsis thaliana
AT3G25150 0.5kb downstream 0.5kb downstream 500 false Chr3: 9156457-9156956 Arabidopsis thaliana
AT3G25150 1.0kb upstream 1.0kb upstream 4144 true Chr3: 9156957-9161100 Arabidopsis thaliana
AT3G25150 1.0kb upstream 1.0kb upstream 1000 false Chr3: 9160101-9161100 Arabidopsis thaliana
AT3G25150 1.0kb downstream 1.0kb downstream 4144 true Chr3: 9155957-9160100 Arabidopsis thaliana
AT3G25150 1.0kb downstream 1.0kb downstream 1000 false Chr3: 9155957-9156956 Arabidopsis thaliana
AT3G25150 2.0kb upstream 2.0kb upstream 5144 true Chr3: 9156957-9162100 Arabidopsis thaliana
AT3G25150 2.0kb upstream 2.0kb upstream 2000 false Chr3: 9160101-9162100 Arabidopsis thaliana
AT3G25150 2.0kb downstream 2.0kb downstream 5144 true Chr3: 9154957-9160100 Arabidopsis thaliana
AT3G25150 2.0kb downstream 2.0kb downstream 2000 false Chr3: 9154957-9156956 Arabidopsis thaliana
AT3G25150 5.0kb upstream 5.0kb upstream 8144 true Chr3: 9156957-9165100 Arabidopsis thaliana
AT3G25150 5.0kb upstream 5.0kb upstream 5000 false Chr3: 9160101-9165100 Arabidopsis thaliana
AT3G25150 5.0kb downstream 5.0kb downstream 8144 true Chr3: 9151957-9160100 Arabidopsis thaliana
AT3G25150 5.0kb downstream 5.0kb downstream 5000 false Chr3: 9151957-9156956 Arabidopsis thaliana
AT3G25150 10.0kb upstream 10.0kb upstream 13144 true Chr3: 9156957-9170100 Arabidopsis thaliana
AT3G25150 10.0kb upstream 10.0kb upstream 10000 false Chr3: 9160101-9170100 Arabidopsis thaliana
AT3G25150 10.0kb downstream 10.0kb downstream 13144 true Chr3: 9146957-9160100 Arabidopsis thaliana
AT3G25150 10.0kb downstream 10.0kb downstream 10000 false Chr3: 9146957-9156956 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122330289 5261 Brassicaceae Singleton cluster - no MSA
123836830 5264 Brassicales-Malvales View MSA
124339420 5266 SBM View MSA
124243770 5268 Malvidae View MSA
124061290 5270 Rosid View MSA
123751309 5271 Pentapetalae View MSA
122795066 5272 Eudicot View MSA
122049730 5273 Angiosperm View MSA
121351180 5274 Embryophyte View MSA
123426443 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.621        
cufflinks 29.077       High
cufflinks 11.383        
cufflinks 26.398        
cufflinks 11.199        
cufflinks 24.407        

0 Strain