Gene : AT3G24840 A. thaliana TAIR10
Defline:  (1 of 1) PTHR23324//PTHR23324:SF56 - SEC14 RELATED PROTEIN // CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED Genomic Order:  2617
Name:  ? AT3G24840 Secondary Identifier:  ? PAC:19659987
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G24840 0.5kb upstream 0.5kb upstream 4287 true Chr3: 9066340-9070626 Arabidopsis thaliana
AT3G24840 0.5kb upstream 0.5kb upstream 500 false Chr3: 9066340-9066839 Arabidopsis thaliana
AT3G24840 0.5kb downstream 0.5kb downstream 4287 true Chr3: 9066840-9071126 Arabidopsis thaliana
AT3G24840 0.5kb downstream 0.5kb downstream 500 false Chr3: 9070627-9071126 Arabidopsis thaliana
AT3G24840 1.0kb upstream 1.0kb upstream 4787 true Chr3: 9065840-9070626 Arabidopsis thaliana
AT3G24840 1.0kb upstream 1.0kb upstream 1000 false Chr3: 9065840-9066839 Arabidopsis thaliana
AT3G24840 1.0kb downstream 1.0kb downstream 4787 true Chr3: 9066840-9071626 Arabidopsis thaliana
AT3G24840 1.0kb downstream 1.0kb downstream 1000 false Chr3: 9070627-9071626 Arabidopsis thaliana
AT3G24840 2.0kb upstream 2.0kb upstream 5787 true Chr3: 9064840-9070626 Arabidopsis thaliana
AT3G24840 2.0kb upstream 2.0kb upstream 2000 false Chr3: 9064840-9066839 Arabidopsis thaliana
AT3G24840 2.0kb downstream 2.0kb downstream 5787 true Chr3: 9066840-9072626 Arabidopsis thaliana
AT3G24840 2.0kb downstream 2.0kb downstream 2000 false Chr3: 9070627-9072626 Arabidopsis thaliana
AT3G24840 5.0kb upstream 5.0kb upstream 8787 true Chr3: 9061840-9070626 Arabidopsis thaliana
AT3G24840 5.0kb upstream 5.0kb upstream 5000 false Chr3: 9061840-9066839 Arabidopsis thaliana
AT3G24840 5.0kb downstream 5.0kb downstream 8787 true Chr3: 9066840-9075626 Arabidopsis thaliana
AT3G24840 5.0kb downstream 5.0kb downstream 5000 false Chr3: 9070627-9075626 Arabidopsis thaliana
AT3G24840 10.0kb upstream 10.0kb upstream 13787 true Chr3: 9056840-9070626 Arabidopsis thaliana
AT3G24840 10.0kb upstream 10.0kb upstream 10000 false Chr3: 9056840-9066839 Arabidopsis thaliana
AT3G24840 10.0kb downstream 10.0kb downstream 13787 true Chr3: 9066840-9080626 Arabidopsis thaliana
AT3G24840 10.0kb downstream 10.0kb downstream 10000 false Chr3: 9070627-9080626 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041205 5273 Angiosperm View MSA
122375397 5261 Brassicaceae View MSA
123829668 5264 Brassicales-Malvales View MSA
124344135 5266 SBM View MSA
124243609 5268 Malvidae View MSA
124062276 5270 Rosid View MSA
123747759 5271 Pentapetalae View MSA
122791330 5272 Eudicot View MSA
123429024 5275 Viridiplantae View MSA
121351321 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.456        
cufflinks 9.277        
cufflinks 2.064       Low
cufflinks 8.947        
cufflinks 2.311        
cufflinks 8.432        

0 Strain