Gene : AT3G24780 A. thaliana TAIR10
Defline:  (1 of 4) PTHR31373//PTHR31373:SF0 - FAMILY NOT NAMED // EMB|CAB86628.1 Genomic Order:  2611
Name:  ? AT3G24780 Secondary Identifier:  ? PAC:19659072
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G24780 0.5kb upstream 0.5kb upstream 2648 true Chr3: 9048946-9051593 Arabidopsis thaliana
AT3G24780 0.5kb upstream 0.5kb upstream 500 false Chr3: 9048946-9049445 Arabidopsis thaliana
AT3G24780 0.5kb downstream 0.5kb downstream 2648 true Chr3: 9049446-9052093 Arabidopsis thaliana
AT3G24780 0.5kb downstream 0.5kb downstream 500 false Chr3: 9051594-9052093 Arabidopsis thaliana
AT3G24780 1.0kb upstream 1.0kb upstream 3148 true Chr3: 9048446-9051593 Arabidopsis thaliana
AT3G24780 1.0kb upstream 1.0kb upstream 1000 false Chr3: 9048446-9049445 Arabidopsis thaliana
AT3G24780 1.0kb downstream 1.0kb downstream 3148 true Chr3: 9049446-9052593 Arabidopsis thaliana
AT3G24780 1.0kb downstream 1.0kb downstream 1000 false Chr3: 9051594-9052593 Arabidopsis thaliana
AT3G24780 2.0kb upstream 2.0kb upstream 4148 true Chr3: 9047446-9051593 Arabidopsis thaliana
AT3G24780 2.0kb upstream 2.0kb upstream 2000 false Chr3: 9047446-9049445 Arabidopsis thaliana
AT3G24780 2.0kb downstream 2.0kb downstream 4148 true Chr3: 9049446-9053593 Arabidopsis thaliana
AT3G24780 2.0kb downstream 2.0kb downstream 2000 false Chr3: 9051594-9053593 Arabidopsis thaliana
AT3G24780 5.0kb upstream 5.0kb upstream 7148 true Chr3: 9044446-9051593 Arabidopsis thaliana
AT3G24780 5.0kb upstream 5.0kb upstream 5000 false Chr3: 9044446-9049445 Arabidopsis thaliana
AT3G24780 5.0kb downstream 5.0kb downstream 7148 true Chr3: 9049446-9056593 Arabidopsis thaliana
AT3G24780 5.0kb downstream 5.0kb downstream 5000 false Chr3: 9051594-9056593 Arabidopsis thaliana
AT3G24780 10.0kb upstream 10.0kb upstream 12148 true Chr3: 9039446-9051593 Arabidopsis thaliana
AT3G24780 10.0kb upstream 10.0kb upstream 10000 false Chr3: 9039446-9049445 Arabidopsis thaliana
AT3G24780 10.0kb downstream 10.0kb downstream 12148 true Chr3: 9049446-9061593 Arabidopsis thaliana
AT3G24780 10.0kb downstream 10.0kb downstream 10000 false Chr3: 9051594-9061593 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041452 5273 Angiosperm View MSA
122338469 5261 Brassicaceae View MSA
123779042 5264 Brassicales-Malvales View MSA
124277376 5266 SBM View MSA
124132585 5268 Malvidae View MSA
124064904 5270 Rosid View MSA
123749450 5271 Pentapetalae View MSA
122797220 5272 Eudicot View MSA
121346363 5274 Embryophyte View MSA
123428550 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.489        
cufflinks 2.481        
cufflinks 0.2     Low  
cufflinks 2.11        
cufflinks 0.127     Low Low
cufflinks 2.767        

0 Strain