Gene : MSH7 A. thaliana TAIR10
Primary Identifier:  ? AT3G24495 Defline:  (1 of 1) PTHR11361:SF31 - DNA MISMATCH REPAIR PROTEIN MSH6
Genomic Order:  2574 Name:  ? AT3G24495
Secondary Identifier:  ? PAC:19658398
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G24495 0.5kb upstream 0.5kb upstream 6304 true Chr3: 8912343-8918646 Arabidopsis thaliana
AT3G24495 0.5kb upstream 0.5kb upstream 500 false Chr3: 8918147-8918646 Arabidopsis thaliana
AT3G24495 0.5kb downstream 0.5kb downstream 6304 true Chr3: 8911843-8918146 Arabidopsis thaliana
AT3G24495 0.5kb downstream 0.5kb downstream 500 false Chr3: 8911843-8912342 Arabidopsis thaliana
AT3G24495 1.0kb upstream 1.0kb upstream 6804 true Chr3: 8912343-8919146 Arabidopsis thaliana
AT3G24495 1.0kb upstream 1.0kb upstream 1000 false Chr3: 8918147-8919146 Arabidopsis thaliana
AT3G24495 1.0kb downstream 1.0kb downstream 6804 true Chr3: 8911343-8918146 Arabidopsis thaliana
AT3G24495 1.0kb downstream 1.0kb downstream 1000 false Chr3: 8911343-8912342 Arabidopsis thaliana
AT3G24495 2.0kb upstream 2.0kb upstream 7804 true Chr3: 8912343-8920146 Arabidopsis thaliana
AT3G24495 2.0kb upstream 2.0kb upstream 2000 false Chr3: 8918147-8920146 Arabidopsis thaliana
AT3G24495 2.0kb downstream 2.0kb downstream 7804 true Chr3: 8910343-8918146 Arabidopsis thaliana
AT3G24495 2.0kb downstream 2.0kb downstream 2000 false Chr3: 8910343-8912342 Arabidopsis thaliana
AT3G24495 5.0kb upstream 5.0kb upstream 10804 true Chr3: 8912343-8923146 Arabidopsis thaliana
AT3G24495 5.0kb upstream 5.0kb upstream 5000 false Chr3: 8918147-8923146 Arabidopsis thaliana
AT3G24495 5.0kb downstream 5.0kb downstream 10804 true Chr3: 8907343-8918146 Arabidopsis thaliana
AT3G24495 5.0kb downstream 5.0kb downstream 5000 false Chr3: 8907343-8912342 Arabidopsis thaliana
AT3G24495 10.0kb upstream 10.0kb upstream 15804 true Chr3: 8912343-8928146 Arabidopsis thaliana
AT3G24495 10.0kb upstream 10.0kb upstream 10000 false Chr3: 8918147-8928146 Arabidopsis thaliana
AT3G24495 10.0kb downstream 10.0kb downstream 15804 true Chr3: 8902343-8918146 Arabidopsis thaliana
AT3G24495 10.0kb downstream 10.0kb downstream 10000 false Chr3: 8902343-8912342 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046363 5273 Angiosperm View MSA
122368806 5261 Brassicaceae View MSA
123834733 5264 Brassicales-Malvales View MSA
124340424 5266 SBM View MSA
124240518 5268 Malvidae View MSA
124065685 5270 Rosid View MSA
123748625 5271 Pentapetalae View MSA
122788803 5272 Eudicot View MSA
121344642 5274 Embryophyte View MSA
123426480 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.787        
cufflinks 2.228        
cufflinks 1.454        
cufflinks 2.313        
cufflinks 1.006       Low
cufflinks 2.461        

0 Strain