Gene : AT3G24100 A. thaliana TAIR10
Defline:  (1 of 2) PTHR13596//PTHR13596:SF5 - SMALL EDRK-RICH FACTOR 1 // SUBFAMILY NOT NAMED Genomic Order:  2535
Name:  ? AT3G24100 Secondary Identifier:  ? PAC:19661262
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G24100 0.5kb upstream 0.5kb upstream 1443 true Chr3: 8702786-8704228 Arabidopsis thaliana
AT3G24100 0.5kb upstream 0.5kb upstream 500 false Chr3: 8702786-8703285 Arabidopsis thaliana
AT3G24100 0.5kb downstream 0.5kb downstream 1443 true Chr3: 8703286-8704728 Arabidopsis thaliana
AT3G24100 0.5kb downstream 0.5kb downstream 500 false Chr3: 8704229-8704728 Arabidopsis thaliana
AT3G24100 1.0kb upstream 1.0kb upstream 1943 true Chr3: 8702286-8704228 Arabidopsis thaliana
AT3G24100 1.0kb upstream 1.0kb upstream 1000 false Chr3: 8702286-8703285 Arabidopsis thaliana
AT3G24100 1.0kb downstream 1.0kb downstream 1943 true Chr3: 8703286-8705228 Arabidopsis thaliana
AT3G24100 1.0kb downstream 1.0kb downstream 1000 false Chr3: 8704229-8705228 Arabidopsis thaliana
AT3G24100 2.0kb upstream 2.0kb upstream 2943 true Chr3: 8701286-8704228 Arabidopsis thaliana
AT3G24100 2.0kb upstream 2.0kb upstream 2000 false Chr3: 8701286-8703285 Arabidopsis thaliana
AT3G24100 2.0kb downstream 2.0kb downstream 2943 true Chr3: 8703286-8706228 Arabidopsis thaliana
AT3G24100 2.0kb downstream 2.0kb downstream 2000 false Chr3: 8704229-8706228 Arabidopsis thaliana
AT3G24100 5.0kb upstream 5.0kb upstream 5943 true Chr3: 8698286-8704228 Arabidopsis thaliana
AT3G24100 5.0kb upstream 5.0kb upstream 5000 false Chr3: 8698286-8703285 Arabidopsis thaliana
AT3G24100 5.0kb downstream 5.0kb downstream 5943 true Chr3: 8703286-8709228 Arabidopsis thaliana
AT3G24100 5.0kb downstream 5.0kb downstream 5000 false Chr3: 8704229-8709228 Arabidopsis thaliana
AT3G24100 10.0kb upstream 10.0kb upstream 10943 true Chr3: 8693286-8704228 Arabidopsis thaliana
AT3G24100 10.0kb upstream 10.0kb upstream 10000 false Chr3: 8693286-8703285 Arabidopsis thaliana
AT3G24100 10.0kb downstream 10.0kb downstream 10943 true Chr3: 8703286-8714228 Arabidopsis thaliana
AT3G24100 10.0kb downstream 10.0kb downstream 10000 false Chr3: 8704229-8714228 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029149 5273 Angiosperm View MSA
122362536 5261 Brassicaceae View MSA
123839464 5264 Brassicales-Malvales View MSA
124343655 5266 SBM View MSA
124250071 5268 Malvidae View MSA
124074834 5270 Rosid View MSA
123749085 5271 Pentapetalae View MSA
122786752 5272 Eudicot View MSA
121349667 5274 Embryophyte View MSA
123424353 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.292       Low
cufflinks 15.497        
cufflinks 8.941        
cufflinks 18.925       High
cufflinks 7.607        
cufflinks 13.173        

0 Strain