Gene : TOPII A. thaliana TAIR10
Primary Identifier:  ? AT3G23890 Defline:  (1 of 1) K03164 - DNA topoisomerase II [EC:5.99.1.3] (TOP2)
Genomic Order:  2510 Name:  ? AT3G23890
Secondary Identifier:  ? PAC:19661529
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G23890 0.5kb upstream 0.5kb upstream 7078 true Chr3: 8624250-8631327 Arabidopsis thaliana
AT3G23890 0.5kb upstream 0.5kb upstream 500 false Chr3: 8624250-8624749 Arabidopsis thaliana
AT3G23890 0.5kb downstream 0.5kb downstream 7078 true Chr3: 8624750-8631827 Arabidopsis thaliana
AT3G23890 0.5kb downstream 0.5kb downstream 500 false Chr3: 8631328-8631827 Arabidopsis thaliana
AT3G23890 1.0kb upstream 1.0kb upstream 7578 true Chr3: 8623750-8631327 Arabidopsis thaliana
AT3G23890 1.0kb upstream 1.0kb upstream 1000 false Chr3: 8623750-8624749 Arabidopsis thaliana
AT3G23890 1.0kb downstream 1.0kb downstream 7578 true Chr3: 8624750-8632327 Arabidopsis thaliana
AT3G23890 1.0kb downstream 1.0kb downstream 1000 false Chr3: 8631328-8632327 Arabidopsis thaliana
AT3G23890 2.0kb upstream 2.0kb upstream 8578 true Chr3: 8622750-8631327 Arabidopsis thaliana
AT3G23890 2.0kb upstream 2.0kb upstream 2000 false Chr3: 8622750-8624749 Arabidopsis thaliana
AT3G23890 2.0kb downstream 2.0kb downstream 8578 true Chr3: 8624750-8633327 Arabidopsis thaliana
AT3G23890 2.0kb downstream 2.0kb downstream 2000 false Chr3: 8631328-8633327 Arabidopsis thaliana
AT3G23890 5.0kb upstream 5.0kb upstream 11578 true Chr3: 8619750-8631327 Arabidopsis thaliana
AT3G23890 5.0kb upstream 5.0kb upstream 5000 false Chr3: 8619750-8624749 Arabidopsis thaliana
AT3G23890 5.0kb downstream 5.0kb downstream 11578 true Chr3: 8624750-8636327 Arabidopsis thaliana
AT3G23890 5.0kb downstream 5.0kb downstream 5000 false Chr3: 8631328-8636327 Arabidopsis thaliana
AT3G23890 10.0kb upstream 10.0kb upstream 16578 true Chr3: 8614750-8631327 Arabidopsis thaliana
AT3G23890 10.0kb upstream 10.0kb upstream 10000 false Chr3: 8614750-8624749 Arabidopsis thaliana
AT3G23890 10.0kb downstream 10.0kb downstream 16578 true Chr3: 8624750-8641327 Arabidopsis thaliana
AT3G23890 10.0kb downstream 10.0kb downstream 10000 false Chr3: 8631328-8641327 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375375 5261 Brassicaceae View MSA
123832805 5264 Brassicales-Malvales View MSA
124337042 5266 SBM View MSA
124238785 5268 Malvidae View MSA
124064018 5270 Rosid View MSA
123736481 5271 Pentapetalae View MSA
122791740 5272 Eudicot View MSA
122046291 5273 Angiosperm View MSA
121345151 5274 Embryophyte View MSA
123423865 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.621        
cufflinks 4.97        
cufflinks 1.334       Low
cufflinks 5.346        
cufflinks 1.097       Low
cufflinks 7.689       High

0 Strain