Gene : HGL1 A. thaliana TAIR10
Primary Identifier:  ? AT3G23640 Defline:  (1 of 1) PTHR22762//PTHR22762:SF7 - ALPHA-GLUCOSIDASE // ALPHA GLUCOSIDASE-LIKE PROTEIN
Genomic Order:  2482 Name:  ? AT3G23640
Secondary Identifier:  ? PAC:19659874
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G23640 0.5kb upstream 0.5kb upstream 8275 true Chr3: 8501310-8509584 Arabidopsis thaliana
AT3G23640 0.5kb upstream 0.5kb upstream 500 false Chr3: 8501310-8501809 Arabidopsis thaliana
AT3G23640 0.5kb downstream 0.5kb downstream 8275 true Chr3: 8501810-8510084 Arabidopsis thaliana
AT3G23640 0.5kb downstream 0.5kb downstream 500 false Chr3: 8509585-8510084 Arabidopsis thaliana
AT3G23640 1.0kb upstream 1.0kb upstream 8775 true Chr3: 8500810-8509584 Arabidopsis thaliana
AT3G23640 1.0kb upstream 1.0kb upstream 1000 false Chr3: 8500810-8501809 Arabidopsis thaliana
AT3G23640 1.0kb downstream 1.0kb downstream 8775 true Chr3: 8501810-8510584 Arabidopsis thaliana
AT3G23640 1.0kb downstream 1.0kb downstream 1000 false Chr3: 8509585-8510584 Arabidopsis thaliana
AT3G23640 2.0kb upstream 2.0kb upstream 9775 true Chr3: 8499810-8509584 Arabidopsis thaliana
AT3G23640 2.0kb upstream 2.0kb upstream 2000 false Chr3: 8499810-8501809 Arabidopsis thaliana
AT3G23640 2.0kb downstream 2.0kb downstream 9775 true Chr3: 8501810-8511584 Arabidopsis thaliana
AT3G23640 2.0kb downstream 2.0kb downstream 2000 false Chr3: 8509585-8511584 Arabidopsis thaliana
AT3G23640 5.0kb upstream 5.0kb upstream 12775 true Chr3: 8496810-8509584 Arabidopsis thaliana
AT3G23640 5.0kb upstream 5.0kb upstream 5000 false Chr3: 8496810-8501809 Arabidopsis thaliana
AT3G23640 5.0kb downstream 5.0kb downstream 12775 true Chr3: 8501810-8514584 Arabidopsis thaliana
AT3G23640 5.0kb downstream 5.0kb downstream 5000 false Chr3: 8509585-8514584 Arabidopsis thaliana
AT3G23640 10.0kb upstream 10.0kb upstream 17775 true Chr3: 8491810-8509584 Arabidopsis thaliana
AT3G23640 10.0kb upstream 10.0kb upstream 10000 false Chr3: 8491810-8501809 Arabidopsis thaliana
AT3G23640 10.0kb downstream 10.0kb downstream 17775 true Chr3: 8501810-8519584 Arabidopsis thaliana
AT3G23640 10.0kb downstream 10.0kb downstream 10000 false Chr3: 8509585-8519584 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360936 5261 Brassicaceae View MSA
123831939 5264 Brassicales-Malvales View MSA
124345782 5266 SBM View MSA
124236856 5268 Malvidae View MSA
124066152 5270 Rosid View MSA
123740745 5271 Pentapetalae View MSA
122786670 5272 Eudicot View MSA
122042416 5273 Angiosperm View MSA
121343930 5274 Embryophyte View MSA
123379942 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.848       Low
cufflinks 11.476       High
cufflinks 8.225        
cufflinks 10.415        
cufflinks 9.368        
cufflinks 9.246        

0 Strain