Gene : AT3G23510 A. thaliana TAIR10
Defline:  (1 of 2) K00574 - cyclopropane-fatty-acyl-phospholipid synthase (E2.1.1.79, cfa) Genomic Order:  2466
Name:  ? AT3G23510 Secondary Identifier:  ? PAC:19661058
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-4942 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G23510 0.5kb upstream 0.5kb upstream 6155 true Chr3: 8427160-8433314 Arabidopsis thaliana
AT3G23510 0.5kb upstream 0.5kb upstream 500 false Chr3: 8427160-8427659 Arabidopsis thaliana
AT3G23510 0.5kb downstream 0.5kb downstream 6155 true Chr3: 8427660-8433814 Arabidopsis thaliana
AT3G23510 0.5kb downstream 0.5kb downstream 500 false Chr3: 8433315-8433814 Arabidopsis thaliana
AT3G23510 1.0kb upstream 1.0kb upstream 6655 true Chr3: 8426660-8433314 Arabidopsis thaliana
AT3G23510 1.0kb upstream 1.0kb upstream 1000 false Chr3: 8426660-8427659 Arabidopsis thaliana
AT3G23510 1.0kb downstream 1.0kb downstream 6655 true Chr3: 8427660-8434314 Arabidopsis thaliana
AT3G23510 1.0kb downstream 1.0kb downstream 1000 false Chr3: 8433315-8434314 Arabidopsis thaliana
AT3G23510 2.0kb upstream 2.0kb upstream 7655 true Chr3: 8425660-8433314 Arabidopsis thaliana
AT3G23510 2.0kb upstream 2.0kb upstream 2000 false Chr3: 8425660-8427659 Arabidopsis thaliana
AT3G23510 2.0kb downstream 2.0kb downstream 7655 true Chr3: 8427660-8435314 Arabidopsis thaliana
AT3G23510 2.0kb downstream 2.0kb downstream 2000 false Chr3: 8433315-8435314 Arabidopsis thaliana
AT3G23510 5.0kb upstream 5.0kb upstream 10655 true Chr3: 8422660-8433314 Arabidopsis thaliana
AT3G23510 5.0kb upstream 5.0kb upstream 5000 false Chr3: 8422660-8427659 Arabidopsis thaliana
AT3G23510 5.0kb downstream 5.0kb downstream 10655 true Chr3: 8427660-8438314 Arabidopsis thaliana
AT3G23510 5.0kb downstream 5.0kb downstream 5000 false Chr3: 8433315-8438314 Arabidopsis thaliana
AT3G23510 10.0kb upstream 10.0kb upstream 15655 true Chr3: 8417660-8433314 Arabidopsis thaliana
AT3G23510 10.0kb upstream 10.0kb upstream 10000 false Chr3: 8417660-8427659 Arabidopsis thaliana
AT3G23510 10.0kb downstream 10.0kb downstream 15655 true Chr3: 8427660-8443314 Arabidopsis thaliana
AT3G23510 10.0kb downstream 10.0kb downstream 10000 false Chr3: 8433315-8443314 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122329918 5261 Brassicaceae Singleton cluster - no MSA
123841864 5264 Brassicales-Malvales View MSA
124323081 5266 SBM View MSA
124251387 5268 Malvidae View MSA
124060864 5270 Rosid View MSA
123737400 5271 Pentapetalae View MSA
122792723 5272 Eudicot View MSA
122047395 5273 Angiosperm View MSA
121346129 5274 Embryophyte View MSA
123428105 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.378       High
cufflinks 0.181     Low Low
cufflinks 0.896        
cufflinks 0.195     Low Low
cufflinks 0.848        
cufflinks 0.907        

0 Strain