Gene : AT3G22690 A. thaliana TAIR10
Defline:  (1 of 1) PF01535//PF07939//PF13041//PF14432 - PPR repeat (PPR) // Protein of unknown function (DUF1685) (DUF1685) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  2371
Name:  ? AT3G22690 Secondary Identifier:  ? PAC:19665186
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G22690 0.5kb upstream 0.5kb upstream 3806 true Chr3: 8021229-8025034 Arabidopsis thaliana
AT3G22690 0.5kb upstream 0.5kb upstream 500 false Chr3: 8024535-8025034 Arabidopsis thaliana
AT3G22690 0.5kb downstream 0.5kb downstream 3806 true Chr3: 8020729-8024534 Arabidopsis thaliana
AT3G22690 0.5kb downstream 0.5kb downstream 500 false Chr3: 8020729-8021228 Arabidopsis thaliana
AT3G22690 1.0kb upstream 1.0kb upstream 4306 true Chr3: 8021229-8025534 Arabidopsis thaliana
AT3G22690 1.0kb upstream 1.0kb upstream 1000 false Chr3: 8024535-8025534 Arabidopsis thaliana
AT3G22690 1.0kb downstream 1.0kb downstream 4306 true Chr3: 8020229-8024534 Arabidopsis thaliana
AT3G22690 1.0kb downstream 1.0kb downstream 1000 false Chr3: 8020229-8021228 Arabidopsis thaliana
AT3G22690 2.0kb upstream 2.0kb upstream 5306 true Chr3: 8021229-8026534 Arabidopsis thaliana
AT3G22690 2.0kb upstream 2.0kb upstream 2000 false Chr3: 8024535-8026534 Arabidopsis thaliana
AT3G22690 2.0kb downstream 2.0kb downstream 5306 true Chr3: 8019229-8024534 Arabidopsis thaliana
AT3G22690 2.0kb downstream 2.0kb downstream 2000 false Chr3: 8019229-8021228 Arabidopsis thaliana
AT3G22690 5.0kb upstream 5.0kb upstream 8306 true Chr3: 8021229-8029534 Arabidopsis thaliana
AT3G22690 5.0kb upstream 5.0kb upstream 5000 false Chr3: 8024535-8029534 Arabidopsis thaliana
AT3G22690 5.0kb downstream 5.0kb downstream 8306 true Chr3: 8016229-8024534 Arabidopsis thaliana
AT3G22690 5.0kb downstream 5.0kb downstream 5000 false Chr3: 8016229-8021228 Arabidopsis thaliana
AT3G22690 10.0kb upstream 10.0kb upstream 13306 true Chr3: 8021229-8034534 Arabidopsis thaliana
AT3G22690 10.0kb upstream 10.0kb upstream 10000 false Chr3: 8024535-8034534 Arabidopsis thaliana
AT3G22690 10.0kb downstream 10.0kb downstream 13306 true Chr3: 8011229-8024534 Arabidopsis thaliana
AT3G22690 10.0kb downstream 10.0kb downstream 10000 false Chr3: 8011229-8021228 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362405 5261 Brassicaceae View MSA
123827627 5264 Brassicales-Malvales View MSA
124343875 5266 SBM View MSA
124248396 5268 Malvidae View MSA
124069931 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.703        
cufflinks 0.705        
cufflinks 0.471        
cufflinks 0.782        
cufflinks 0.365       Low
cufflinks 0.748        

0 Strain