Gene : AT3G22845 A. thaliana TAIR10
Defline:  (1 of 1) PTHR22811:SF31 - RE49489P Genomic Order:  2388
Name:  ? AT3G22845 Secondary Identifier:  ? PAC:19660502
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G22845 0.5kb upstream 0.5kb upstream 1941 true Chr3: 8086807-8088747 Arabidopsis thaliana
AT3G22845 0.5kb upstream 0.5kb upstream 500 false Chr3: 8086807-8087306 Arabidopsis thaliana
AT3G22845 0.5kb downstream 0.5kb downstream 1941 true Chr3: 8087307-8089247 Arabidopsis thaliana
AT3G22845 0.5kb downstream 0.5kb downstream 500 false Chr3: 8088748-8089247 Arabidopsis thaliana
AT3G22845 1.0kb upstream 1.0kb upstream 2441 true Chr3: 8086307-8088747 Arabidopsis thaliana
AT3G22845 1.0kb upstream 1.0kb upstream 1000 false Chr3: 8086307-8087306 Arabidopsis thaliana
AT3G22845 1.0kb downstream 1.0kb downstream 2441 true Chr3: 8087307-8089747 Arabidopsis thaliana
AT3G22845 1.0kb downstream 1.0kb downstream 1000 false Chr3: 8088748-8089747 Arabidopsis thaliana
AT3G22845 2.0kb upstream 2.0kb upstream 3441 true Chr3: 8085307-8088747 Arabidopsis thaliana
AT3G22845 2.0kb upstream 2.0kb upstream 2000 false Chr3: 8085307-8087306 Arabidopsis thaliana
AT3G22845 2.0kb downstream 2.0kb downstream 3441 true Chr3: 8087307-8090747 Arabidopsis thaliana
AT3G22845 2.0kb downstream 2.0kb downstream 2000 false Chr3: 8088748-8090747 Arabidopsis thaliana
AT3G22845 5.0kb upstream 5.0kb upstream 6441 true Chr3: 8082307-8088747 Arabidopsis thaliana
AT3G22845 5.0kb upstream 5.0kb upstream 5000 false Chr3: 8082307-8087306 Arabidopsis thaliana
AT3G22845 5.0kb downstream 5.0kb downstream 6441 true Chr3: 8087307-8093747 Arabidopsis thaliana
AT3G22845 5.0kb downstream 5.0kb downstream 5000 false Chr3: 8088748-8093747 Arabidopsis thaliana
AT3G22845 10.0kb upstream 10.0kb upstream 11441 true Chr3: 8077307-8088747 Arabidopsis thaliana
AT3G22845 10.0kb upstream 10.0kb upstream 10000 false Chr3: 8077307-8087306 Arabidopsis thaliana
AT3G22845 10.0kb downstream 10.0kb downstream 11441 true Chr3: 8087307-8098747 Arabidopsis thaliana
AT3G22845 10.0kb downstream 10.0kb downstream 10000 false Chr3: 8088748-8098747 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365485 5261 Brassicaceae View MSA
123839760 5264 Brassicales-Malvales View MSA
124343285 5266 SBM View MSA
124251356 5268 Malvidae View MSA
124066384 5270 Rosid View MSA
123737785 5271 Pentapetalae View MSA
122791427 5272 Eudicot View MSA
122044870 5273 Angiosperm View MSA
121348336 5274 Embryophyte View MSA
123427292 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 48.053     High  
cufflinks 53.055     High  
cufflinks 38.335     High Low
cufflinks 57.02     High High
cufflinks 41.851     High  
cufflinks 50.061     High  

0 Strain