Gene : SOL1 A. thaliana TAIR10
Primary Identifier:  ? AT3G22760 Defline:  (1 of 3) PTHR12446//PTHR12446:SF21 - TESMIN/TSO1-RELATED // CRC DOMAIN-CONTAINING PROTEIN TSO1-RELATED
Genomic Order:  2379 Name:  ? AT3G22760
Secondary Identifier:  ? PAC:19663230
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G22760 0.5kb upstream 0.5kb upstream 3576 true Chr3: 8043955-8047530 Arabidopsis thaliana
AT3G22760 0.5kb upstream 0.5kb upstream 500 false Chr3: 8043955-8044454 Arabidopsis thaliana
AT3G22760 0.5kb downstream 0.5kb downstream 3576 true Chr3: 8044455-8048030 Arabidopsis thaliana
AT3G22760 0.5kb downstream 0.5kb downstream 500 false Chr3: 8047531-8048030 Arabidopsis thaliana
AT3G22760 1.0kb upstream 1.0kb upstream 4076 true Chr3: 8043455-8047530 Arabidopsis thaliana
AT3G22760 1.0kb upstream 1.0kb upstream 1000 false Chr3: 8043455-8044454 Arabidopsis thaliana
AT3G22760 1.0kb downstream 1.0kb downstream 4076 true Chr3: 8044455-8048530 Arabidopsis thaliana
AT3G22760 1.0kb downstream 1.0kb downstream 1000 false Chr3: 8047531-8048530 Arabidopsis thaliana
AT3G22760 2.0kb upstream 2.0kb upstream 5076 true Chr3: 8042455-8047530 Arabidopsis thaliana
AT3G22760 2.0kb upstream 2.0kb upstream 2000 false Chr3: 8042455-8044454 Arabidopsis thaliana
AT3G22760 2.0kb downstream 2.0kb downstream 5076 true Chr3: 8044455-8049530 Arabidopsis thaliana
AT3G22760 2.0kb downstream 2.0kb downstream 2000 false Chr3: 8047531-8049530 Arabidopsis thaliana
AT3G22760 5.0kb upstream 5.0kb upstream 8076 true Chr3: 8039455-8047530 Arabidopsis thaliana
AT3G22760 5.0kb upstream 5.0kb upstream 5000 false Chr3: 8039455-8044454 Arabidopsis thaliana
AT3G22760 5.0kb downstream 5.0kb downstream 8076 true Chr3: 8044455-8052530 Arabidopsis thaliana
AT3G22760 5.0kb downstream 5.0kb downstream 5000 false Chr3: 8047531-8052530 Arabidopsis thaliana
AT3G22760 10.0kb upstream 10.0kb upstream 13076 true Chr3: 8034455-8047530 Arabidopsis thaliana
AT3G22760 10.0kb upstream 10.0kb upstream 10000 false Chr3: 8034455-8044454 Arabidopsis thaliana
AT3G22760 10.0kb downstream 10.0kb downstream 13076 true Chr3: 8044455-8057530 Arabidopsis thaliana
AT3G22760 10.0kb downstream 10.0kb downstream 10000 false Chr3: 8047531-8057530 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375339 5261 Brassicaceae View MSA
123837070 5264 Brassicales-Malvales View MSA
124336446 5266 SBM View MSA
124250190 5268 Malvidae View MSA
124072110 5270 Rosid View MSA
123746953 5271 Pentapetalae View MSA
122792977 5272 Eudicot View MSA
122047372 5273 Angiosperm View MSA
121349909 5274 Embryophyte View MSA
123426596 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.653       High
cufflinks 2.241        
cufflinks 3.786        
cufflinks 2.648        
cufflinks 2.426        
cufflinks 2.436        

0 Strain