Gene : OASA2 A. thaliana TAIR10
Primary Identifier:  ? AT3G22460 Defline:  (1 of 2) PTHR10314//PTHR10314:SF101 - SER/THR DEHYDRATASE, TRP SYNTHASE // SUBFAMILY NOT NAMED
Genomic Order:  2349 Name:  ? AT3G22460
Secondary Identifier:  ? PAC:19660983
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana CYSTSYN-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-6936 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G22460 0.5kb upstream 0.5kb upstream 2871 true Chr3: 7963037-7965907 Arabidopsis thaliana
AT3G22460 0.5kb upstream 0.5kb upstream 500 false Chr3: 7963037-7963536 Arabidopsis thaliana
AT3G22460 0.5kb downstream 0.5kb downstream 2871 true Chr3: 7963537-7966407 Arabidopsis thaliana
AT3G22460 0.5kb downstream 0.5kb downstream 500 false Chr3: 7965908-7966407 Arabidopsis thaliana
AT3G22460 1.0kb upstream 1.0kb upstream 3371 true Chr3: 7962537-7965907 Arabidopsis thaliana
AT3G22460 1.0kb upstream 1.0kb upstream 1000 false Chr3: 7962537-7963536 Arabidopsis thaliana
AT3G22460 1.0kb downstream 1.0kb downstream 3371 true Chr3: 7963537-7966907 Arabidopsis thaliana
AT3G22460 1.0kb downstream 1.0kb downstream 1000 false Chr3: 7965908-7966907 Arabidopsis thaliana
AT3G22460 2.0kb upstream 2.0kb upstream 4371 true Chr3: 7961537-7965907 Arabidopsis thaliana
AT3G22460 2.0kb upstream 2.0kb upstream 2000 false Chr3: 7961537-7963536 Arabidopsis thaliana
AT3G22460 2.0kb downstream 2.0kb downstream 4371 true Chr3: 7963537-7967907 Arabidopsis thaliana
AT3G22460 2.0kb downstream 2.0kb downstream 2000 false Chr3: 7965908-7967907 Arabidopsis thaliana
AT3G22460 5.0kb upstream 5.0kb upstream 7371 true Chr3: 7958537-7965907 Arabidopsis thaliana
AT3G22460 5.0kb upstream 5.0kb upstream 5000 false Chr3: 7958537-7963536 Arabidopsis thaliana
AT3G22460 5.0kb downstream 5.0kb downstream 7371 true Chr3: 7963537-7970907 Arabidopsis thaliana
AT3G22460 5.0kb downstream 5.0kb downstream 5000 false Chr3: 7965908-7970907 Arabidopsis thaliana
AT3G22460 10.0kb upstream 10.0kb upstream 12371 true Chr3: 7953537-7965907 Arabidopsis thaliana
AT3G22460 10.0kb upstream 10.0kb upstream 10000 false Chr3: 7953537-7963536 Arabidopsis thaliana
AT3G22460 10.0kb downstream 10.0kb downstream 12371 true Chr3: 7963537-7975907 Arabidopsis thaliana
AT3G22460 10.0kb downstream 10.0kb downstream 10000 false Chr3: 7965908-7975907 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381896 5261 Brassicaceae View MSA
123803524 5264 Brassicales-Malvales View MSA
124300626 5266 SBM View MSA
124256173 5268 Malvidae View MSA
124073485 5270 Rosid View MSA
123750353 5271 Pentapetalae View MSA
122787082 5272 Eudicot View MSA
122044204 5273 Angiosperm View MSA
121350970 5274 Embryophyte View MSA
123424805 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.124        
cufflinks 4.24        
cufflinks 5.897        
cufflinks 4.997        
cufflinks 8.713       High
cufflinks 2.094       Low

0 Strain