Gene : AT3G22470 A. thaliana TAIR10
Defline:  (1 of 423) PF13041 - PPR repeat family (PPR_2) Genomic Order:  2350
Name:  ? AT3G22470 Secondary Identifier:  ? PAC:19662867
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G22470 0.5kb upstream 0.5kb upstream 2537 true Chr3: 7965954-7968490 Arabidopsis thaliana
AT3G22470 0.5kb upstream 0.5kb upstream 500 false Chr3: 7967991-7968490 Arabidopsis thaliana
AT3G22470 0.5kb downstream 0.5kb downstream 2537 true Chr3: 7965454-7967990 Arabidopsis thaliana
AT3G22470 0.5kb downstream 0.5kb downstream 500 false Chr3: 7965454-7965953 Arabidopsis thaliana
AT3G22470 1.0kb upstream 1.0kb upstream 3037 true Chr3: 7965954-7968990 Arabidopsis thaliana
AT3G22470 1.0kb upstream 1.0kb upstream 1000 false Chr3: 7967991-7968990 Arabidopsis thaliana
AT3G22470 1.0kb downstream 1.0kb downstream 3037 true Chr3: 7964954-7967990 Arabidopsis thaliana
AT3G22470 1.0kb downstream 1.0kb downstream 1000 false Chr3: 7964954-7965953 Arabidopsis thaliana
AT3G22470 2.0kb upstream 2.0kb upstream 4037 true Chr3: 7965954-7969990 Arabidopsis thaliana
AT3G22470 2.0kb upstream 2.0kb upstream 2000 false Chr3: 7967991-7969990 Arabidopsis thaliana
AT3G22470 2.0kb downstream 2.0kb downstream 4037 true Chr3: 7963954-7967990 Arabidopsis thaliana
AT3G22470 2.0kb downstream 2.0kb downstream 2000 false Chr3: 7963954-7965953 Arabidopsis thaliana
AT3G22470 5.0kb upstream 5.0kb upstream 7037 true Chr3: 7965954-7972990 Arabidopsis thaliana
AT3G22470 5.0kb upstream 5.0kb upstream 5000 false Chr3: 7967991-7972990 Arabidopsis thaliana
AT3G22470 5.0kb downstream 5.0kb downstream 7037 true Chr3: 7960954-7967990 Arabidopsis thaliana
AT3G22470 5.0kb downstream 5.0kb downstream 5000 false Chr3: 7960954-7965953 Arabidopsis thaliana
AT3G22470 10.0kb upstream 10.0kb upstream 12037 true Chr3: 7965954-7977990 Arabidopsis thaliana
AT3G22470 10.0kb upstream 10.0kb upstream 10000 false Chr3: 7967991-7977990 Arabidopsis thaliana
AT3G22470 10.0kb downstream 10.0kb downstream 12037 true Chr3: 7955954-7967990 Arabidopsis thaliana
AT3G22470 10.0kb downstream 10.0kb downstream 10000 false Chr3: 7955954-7965953 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381662 5261 Brassicaceae View MSA
123841436 5264 Brassicales-Malvales View MSA
124350672 5266 SBM View MSA
124254642 5268 Malvidae View MSA
124074430 5270 Rosid View MSA
123753756 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.167        
cufflinks 2.417       High
cufflinks 1.915        
cufflinks 2.358        
cufflinks 1.696       Low
cufflinks 2.005        

0 Strain