Gene : PMH2 A. thaliana TAIR10
Primary Identifier:  ? AT3G22330 Defline:  (1 of 2) PTHR24031//PTHR24031:SF326 - RNA HELICASE // DEAD-BOX ATP-DEPENDENT RNA HELICASE 53-RELATED
Genomic Order:  2333 Name:  ? AT3G22330
Secondary Identifier:  ? PAC:19659830
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G22330 0.5kb upstream 0.5kb upstream 3330 true Chr3: 7892037-7895366 Arabidopsis thaliana
AT3G22330 0.5kb upstream 0.5kb upstream 500 false Chr3: 7892037-7892536 Arabidopsis thaliana
AT3G22330 0.5kb downstream 0.5kb downstream 3330 true Chr3: 7892537-7895866 Arabidopsis thaliana
AT3G22330 0.5kb downstream 0.5kb downstream 500 false Chr3: 7895367-7895866 Arabidopsis thaliana
AT3G22330 1.0kb upstream 1.0kb upstream 3830 true Chr3: 7891537-7895366 Arabidopsis thaliana
AT3G22330 1.0kb upstream 1.0kb upstream 1000 false Chr3: 7891537-7892536 Arabidopsis thaliana
AT3G22330 1.0kb downstream 1.0kb downstream 3830 true Chr3: 7892537-7896366 Arabidopsis thaliana
AT3G22330 1.0kb downstream 1.0kb downstream 1000 false Chr3: 7895367-7896366 Arabidopsis thaliana
AT3G22330 2.0kb upstream 2.0kb upstream 4830 true Chr3: 7890537-7895366 Arabidopsis thaliana
AT3G22330 2.0kb upstream 2.0kb upstream 2000 false Chr3: 7890537-7892536 Arabidopsis thaliana
AT3G22330 2.0kb downstream 2.0kb downstream 4830 true Chr3: 7892537-7897366 Arabidopsis thaliana
AT3G22330 2.0kb downstream 2.0kb downstream 2000 false Chr3: 7895367-7897366 Arabidopsis thaliana
AT3G22330 5.0kb upstream 5.0kb upstream 7830 true Chr3: 7887537-7895366 Arabidopsis thaliana
AT3G22330 5.0kb upstream 5.0kb upstream 5000 false Chr3: 7887537-7892536 Arabidopsis thaliana
AT3G22330 5.0kb downstream 5.0kb downstream 7830 true Chr3: 7892537-7900366 Arabidopsis thaliana
AT3G22330 5.0kb downstream 5.0kb downstream 5000 false Chr3: 7895367-7900366 Arabidopsis thaliana
AT3G22330 10.0kb upstream 10.0kb upstream 12830 true Chr3: 7882537-7895366 Arabidopsis thaliana
AT3G22330 10.0kb upstream 10.0kb upstream 10000 false Chr3: 7882537-7892536 Arabidopsis thaliana
AT3G22330 10.0kb downstream 10.0kb downstream 12830 true Chr3: 7892537-7905366 Arabidopsis thaliana
AT3G22330 10.0kb downstream 10.0kb downstream 10000 false Chr3: 7895367-7905366 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363491 5261 Brassicaceae View MSA
123832070 5264 Brassicales-Malvales View MSA
124340945 5266 SBM View MSA
124249988 5268 Malvidae View MSA
124062344 5270 Rosid View MSA
123751668 5271 Pentapetalae View MSA
122790470 5272 Eudicot View MSA
122044594 5273 Angiosperm View MSA
121310318 5274 Embryophyte View MSA
123426449 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.056        
cufflinks 20.185        
cufflinks 18.108       Low
cufflinks 23.138       High
cufflinks 18.472       Low
cufflinks 21.814        

0 Strain