Gene : AOX1A A. thaliana TAIR10
Primary Identifier:  ? AT3G22370 Defline:  (1 of 3) PTHR31803//PTHR31803:SF4 - FAMILY NOT NAMED // UBIQUINOL OXIDASE 1A, MITOCHONDRIAL-RELATED
Genomic Order:  2337 Name:  ? AT3G22370
Secondary Identifier:  ? PAC:19659647
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-4302 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G22370 0.5kb upstream 0.5kb upstream 2450 true Chr3: 7906291-7908740 Arabidopsis thaliana
AT3G22370 0.5kb upstream 0.5kb upstream 500 false Chr3: 7906291-7906790 Arabidopsis thaliana
AT3G22370 0.5kb downstream 0.5kb downstream 2450 true Chr3: 7906791-7909240 Arabidopsis thaliana
AT3G22370 0.5kb downstream 0.5kb downstream 500 false Chr3: 7908741-7909240 Arabidopsis thaliana
AT3G22370 1.0kb upstream 1.0kb upstream 2950 true Chr3: 7905791-7908740 Arabidopsis thaliana
AT3G22370 1.0kb upstream 1.0kb upstream 1000 false Chr3: 7905791-7906790 Arabidopsis thaliana
AT3G22370 1.0kb downstream 1.0kb downstream 2950 true Chr3: 7906791-7909740 Arabidopsis thaliana
AT3G22370 1.0kb downstream 1.0kb downstream 1000 false Chr3: 7908741-7909740 Arabidopsis thaliana
AT3G22370 2.0kb upstream 2.0kb upstream 3950 true Chr3: 7904791-7908740 Arabidopsis thaliana
AT3G22370 2.0kb upstream 2.0kb upstream 2000 false Chr3: 7904791-7906790 Arabidopsis thaliana
AT3G22370 2.0kb downstream 2.0kb downstream 3950 true Chr3: 7906791-7910740 Arabidopsis thaliana
AT3G22370 2.0kb downstream 2.0kb downstream 2000 false Chr3: 7908741-7910740 Arabidopsis thaliana
AT3G22370 5.0kb upstream 5.0kb upstream 6950 true Chr3: 7901791-7908740 Arabidopsis thaliana
AT3G22370 5.0kb upstream 5.0kb upstream 5000 false Chr3: 7901791-7906790 Arabidopsis thaliana
AT3G22370 5.0kb downstream 5.0kb downstream 6950 true Chr3: 7906791-7913740 Arabidopsis thaliana
AT3G22370 5.0kb downstream 5.0kb downstream 5000 false Chr3: 7908741-7913740 Arabidopsis thaliana
AT3G22370 10.0kb upstream 10.0kb upstream 11950 true Chr3: 7896791-7908740 Arabidopsis thaliana
AT3G22370 10.0kb upstream 10.0kb upstream 10000 false Chr3: 7896791-7906790 Arabidopsis thaliana
AT3G22370 10.0kb downstream 10.0kb downstream 11950 true Chr3: 7906791-7918740 Arabidopsis thaliana
AT3G22370 10.0kb downstream 10.0kb downstream 10000 false Chr3: 7908741-7918740 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360781 5261 Brassicaceae View MSA
123828425 5264 Brassicales-Malvales View MSA
124343478 5266 SBM View MSA
124246674 5268 Malvidae View MSA
124071385 5270 Rosid View MSA
123743047 5271 Pentapetalae View MSA
122794845 5272 Eudicot View MSA
122048992 5273 Angiosperm View MSA
121347153 5274 Embryophyte View MSA
123426662 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.145        
cufflinks 13.653        
cufflinks 56.326     High  
cufflinks 21.819        
cufflinks 69.752     High High
cufflinks 10.347       Low

0 Strain