Gene : AT3G22220 A. thaliana TAIR10
Defline:  (1 of 2) PTHR32166//PTHR32166:SF27 - FAMILY NOT NAMED // HAT DIMERIZATION DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  2320
Name:  ? AT3G22220 Secondary Identifier:  ? PAC:19663899
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G22220 0.5kb upstream 0.5kb upstream 3820 true Chr3: 7839555-7843374 Arabidopsis thaliana
AT3G22220 0.5kb upstream 0.5kb upstream 500 false Chr3: 7842875-7843374 Arabidopsis thaliana
AT3G22220 0.5kb downstream 0.5kb downstream 3820 true Chr3: 7839055-7842874 Arabidopsis thaliana
AT3G22220 0.5kb downstream 0.5kb downstream 500 false Chr3: 7839055-7839554 Arabidopsis thaliana
AT3G22220 1.0kb upstream 1.0kb upstream 4320 true Chr3: 7839555-7843874 Arabidopsis thaliana
AT3G22220 1.0kb upstream 1.0kb upstream 1000 false Chr3: 7842875-7843874 Arabidopsis thaliana
AT3G22220 1.0kb downstream 1.0kb downstream 4320 true Chr3: 7838555-7842874 Arabidopsis thaliana
AT3G22220 1.0kb downstream 1.0kb downstream 1000 false Chr3: 7838555-7839554 Arabidopsis thaliana
AT3G22220 2.0kb upstream 2.0kb upstream 5320 true Chr3: 7839555-7844874 Arabidopsis thaliana
AT3G22220 2.0kb upstream 2.0kb upstream 2000 false Chr3: 7842875-7844874 Arabidopsis thaliana
AT3G22220 2.0kb downstream 2.0kb downstream 5320 true Chr3: 7837555-7842874 Arabidopsis thaliana
AT3G22220 2.0kb downstream 2.0kb downstream 2000 false Chr3: 7837555-7839554 Arabidopsis thaliana
AT3G22220 5.0kb upstream 5.0kb upstream 8320 true Chr3: 7839555-7847874 Arabidopsis thaliana
AT3G22220 5.0kb upstream 5.0kb upstream 5000 false Chr3: 7842875-7847874 Arabidopsis thaliana
AT3G22220 5.0kb downstream 5.0kb downstream 8320 true Chr3: 7834555-7842874 Arabidopsis thaliana
AT3G22220 5.0kb downstream 5.0kb downstream 5000 false Chr3: 7834555-7839554 Arabidopsis thaliana
AT3G22220 10.0kb upstream 10.0kb upstream 13320 true Chr3: 7839555-7852874 Arabidopsis thaliana
AT3G22220 10.0kb upstream 10.0kb upstream 10000 false Chr3: 7842875-7852874 Arabidopsis thaliana
AT3G22220 10.0kb downstream 10.0kb downstream 13320 true Chr3: 7829555-7842874 Arabidopsis thaliana
AT3G22220 10.0kb downstream 10.0kb downstream 10000 false Chr3: 7829555-7839554 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122331774 5261 Brassicaceae View MSA
123840638 5264 Brassicales-Malvales View MSA
124339493 5266 SBM View MSA
124251676 5268 Malvidae View MSA
124071231 5270 Rosid View MSA
123752967 5271 Pentapetalae View MSA
122794205 5272 Eudicot View MSA
122051703 5273 Angiosperm View MSA
121347820 5274 Embryophyte View MSA
123428458 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.939        
cufflinks 4.365        
cufflinks 2.704       Low
cufflinks 5.089       High
cufflinks 2.813       Low
cufflinks 4.931        

0 Strain