Gene : RPS10 A. thaliana TAIR10
Primary Identifier:  ? AT3G22300 Defline:  (1 of 1) PTHR11700:SF7 - 40S RIBOSOMAL PROTEIN S10, MITOCHONDRIAL
Genomic Order:  2330 Name:  ? AT3G22300
Secondary Identifier:  ? PAC:19660361
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G22300 0.5kb upstream 0.5kb upstream 1653 true Chr3: 7885168-7886820 Arabidopsis thaliana
AT3G22300 0.5kb upstream 0.5kb upstream 500 false Chr3: 7885168-7885667 Arabidopsis thaliana
AT3G22300 0.5kb downstream 0.5kb downstream 1653 true Chr3: 7885668-7887320 Arabidopsis thaliana
AT3G22300 0.5kb downstream 0.5kb downstream 500 false Chr3: 7886821-7887320 Arabidopsis thaliana
AT3G22300 1.0kb upstream 1.0kb upstream 2153 true Chr3: 7884668-7886820 Arabidopsis thaliana
AT3G22300 1.0kb upstream 1.0kb upstream 1000 false Chr3: 7884668-7885667 Arabidopsis thaliana
AT3G22300 1.0kb downstream 1.0kb downstream 2153 true Chr3: 7885668-7887820 Arabidopsis thaliana
AT3G22300 1.0kb downstream 1.0kb downstream 1000 false Chr3: 7886821-7887820 Arabidopsis thaliana
AT3G22300 2.0kb upstream 2.0kb upstream 3153 true Chr3: 7883668-7886820 Arabidopsis thaliana
AT3G22300 2.0kb upstream 2.0kb upstream 2000 false Chr3: 7883668-7885667 Arabidopsis thaliana
AT3G22300 2.0kb downstream 2.0kb downstream 3153 true Chr3: 7885668-7888820 Arabidopsis thaliana
AT3G22300 2.0kb downstream 2.0kb downstream 2000 false Chr3: 7886821-7888820 Arabidopsis thaliana
AT3G22300 5.0kb upstream 5.0kb upstream 6153 true Chr3: 7880668-7886820 Arabidopsis thaliana
AT3G22300 5.0kb upstream 5.0kb upstream 5000 false Chr3: 7880668-7885667 Arabidopsis thaliana
AT3G22300 5.0kb downstream 5.0kb downstream 6153 true Chr3: 7885668-7891820 Arabidopsis thaliana
AT3G22300 5.0kb downstream 5.0kb downstream 5000 false Chr3: 7886821-7891820 Arabidopsis thaliana
AT3G22300 10.0kb upstream 10.0kb upstream 11153 true Chr3: 7875668-7886820 Arabidopsis thaliana
AT3G22300 10.0kb upstream 10.0kb upstream 10000 false Chr3: 7875668-7885667 Arabidopsis thaliana
AT3G22300 10.0kb downstream 10.0kb downstream 11153 true Chr3: 7885668-7896820 Arabidopsis thaliana
AT3G22300 10.0kb downstream 10.0kb downstream 10000 false Chr3: 7886821-7896820 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028495 5273 Angiosperm View MSA
122371239 5261 Brassicaceae View MSA
123800130 5264 Brassicales-Malvales View MSA
124297578 5266 SBM View MSA
124149429 5268 Malvidae View MSA
123875237 5270 Rosid View MSA
123459095 5271 Pentapetalae View MSA
122494490 5272 Eudicot View MSA
121348119 5274 Embryophyte View MSA
123380732 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.066        
cufflinks 20.105        
cufflinks 16.302        
cufflinks 21.207        
cufflinks 13.067       Low
cufflinks 21.449        

0 Strain