Gene : AT3G22080 A. thaliana TAIR10
Defline:  (1 of 64) KOG1987 - Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains Genomic Order:  2305
Name:  ? AT3G22080 Secondary Identifier:  ? PAC:19664257
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G22080 0.5kb upstream 0.5kb upstream 4401 true Chr3: 7777818-7782218 Arabidopsis thaliana
AT3G22080 0.5kb upstream 0.5kb upstream 500 false Chr3: 7781719-7782218 Arabidopsis thaliana
AT3G22080 0.5kb downstream 0.5kb downstream 4401 true Chr3: 7777318-7781718 Arabidopsis thaliana
AT3G22080 0.5kb downstream 0.5kb downstream 500 false Chr3: 7777318-7777817 Arabidopsis thaliana
AT3G22080 1.0kb upstream 1.0kb upstream 4901 true Chr3: 7777818-7782718 Arabidopsis thaliana
AT3G22080 1.0kb upstream 1.0kb upstream 1000 false Chr3: 7781719-7782718 Arabidopsis thaliana
AT3G22080 1.0kb downstream 1.0kb downstream 4901 true Chr3: 7776818-7781718 Arabidopsis thaliana
AT3G22080 1.0kb downstream 1.0kb downstream 1000 false Chr3: 7776818-7777817 Arabidopsis thaliana
AT3G22080 2.0kb upstream 2.0kb upstream 5901 true Chr3: 7777818-7783718 Arabidopsis thaliana
AT3G22080 2.0kb upstream 2.0kb upstream 2000 false Chr3: 7781719-7783718 Arabidopsis thaliana
AT3G22080 2.0kb downstream 2.0kb downstream 5901 true Chr3: 7775818-7781718 Arabidopsis thaliana
AT3G22080 2.0kb downstream 2.0kb downstream 2000 false Chr3: 7775818-7777817 Arabidopsis thaliana
AT3G22080 5.0kb upstream 5.0kb upstream 8901 true Chr3: 7777818-7786718 Arabidopsis thaliana
AT3G22080 5.0kb upstream 5.0kb upstream 5000 false Chr3: 7781719-7786718 Arabidopsis thaliana
AT3G22080 5.0kb downstream 5.0kb downstream 8901 true Chr3: 7772818-7781718 Arabidopsis thaliana
AT3G22080 5.0kb downstream 5.0kb downstream 5000 false Chr3: 7772818-7777817 Arabidopsis thaliana
AT3G22080 10.0kb upstream 10.0kb upstream 13901 true Chr3: 7777818-7791718 Arabidopsis thaliana
AT3G22080 10.0kb upstream 10.0kb upstream 10000 false Chr3: 7781719-7791718 Arabidopsis thaliana
AT3G22080 10.0kb downstream 10.0kb downstream 13901 true Chr3: 7767818-7781718 Arabidopsis thaliana
AT3G22080 10.0kb downstream 10.0kb downstream 10000 false Chr3: 7767818-7777817 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029521 5273 Angiosperm View MSA
122379213 5261 Brassicaceae View MSA
123802145 5264 Brassicales-Malvales View MSA
124299362 5266 SBM View MSA
124150797 5268 Malvidae View MSA
124073089 5270 Rosid View MSA
123752970 5271 Pentapetalae View MSA
122797935 5272 Eudicot View MSA
123429159 5275 Viridiplantae View MSA
121349273 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain