Gene : CWLP A. thaliana TAIR10
Primary Identifier:  ? AT3G22120 Defline:  (1 of 2) PTHR31731//PTHR31731:SF16 - FAMILY NOT NAMED // BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN-LIKE PROTEIN
Genomic Order:  2310 Name:  ? AT3G22120
Secondary Identifier:  ? PAC:19661875
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G22120 0.5kb upstream 0.5kb upstream 1854 true Chr3: 7794957-7796810 Arabidopsis thaliana
AT3G22120 0.5kb upstream 0.5kb upstream 500 false Chr3: 7796311-7796810 Arabidopsis thaliana
AT3G22120 0.5kb downstream 0.5kb downstream 1854 true Chr3: 7794457-7796310 Arabidopsis thaliana
AT3G22120 0.5kb downstream 0.5kb downstream 500 false Chr3: 7794457-7794956 Arabidopsis thaliana
AT3G22120 1.0kb upstream 1.0kb upstream 2354 true Chr3: 7794957-7797310 Arabidopsis thaliana
AT3G22120 1.0kb upstream 1.0kb upstream 1000 false Chr3: 7796311-7797310 Arabidopsis thaliana
AT3G22120 1.0kb downstream 1.0kb downstream 2354 true Chr3: 7793957-7796310 Arabidopsis thaliana
AT3G22120 1.0kb downstream 1.0kb downstream 1000 false Chr3: 7793957-7794956 Arabidopsis thaliana
AT3G22120 2.0kb upstream 2.0kb upstream 3354 true Chr3: 7794957-7798310 Arabidopsis thaliana
AT3G22120 2.0kb upstream 2.0kb upstream 2000 false Chr3: 7796311-7798310 Arabidopsis thaliana
AT3G22120 2.0kb downstream 2.0kb downstream 3354 true Chr3: 7792957-7796310 Arabidopsis thaliana
AT3G22120 2.0kb downstream 2.0kb downstream 2000 false Chr3: 7792957-7794956 Arabidopsis thaliana
AT3G22120 5.0kb upstream 5.0kb upstream 6354 true Chr3: 7794957-7801310 Arabidopsis thaliana
AT3G22120 5.0kb upstream 5.0kb upstream 5000 false Chr3: 7796311-7801310 Arabidopsis thaliana
AT3G22120 5.0kb downstream 5.0kb downstream 6354 true Chr3: 7789957-7796310 Arabidopsis thaliana
AT3G22120 5.0kb downstream 5.0kb downstream 5000 false Chr3: 7789957-7794956 Arabidopsis thaliana
AT3G22120 10.0kb upstream 10.0kb upstream 11354 true Chr3: 7794957-7806310 Arabidopsis thaliana
AT3G22120 10.0kb upstream 10.0kb upstream 10000 false Chr3: 7796311-7806310 Arabidopsis thaliana
AT3G22120 10.0kb downstream 10.0kb downstream 11354 true Chr3: 7784957-7796310 Arabidopsis thaliana
AT3G22120 10.0kb downstream 10.0kb downstream 10000 false Chr3: 7784957-7794956 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122330008 5261 Brassicaceae Singleton cluster - no MSA
123841341 5264 Brassicales-Malvales View MSA
124350591 5266 SBM View MSA
124253998 5268 Malvidae View MSA
124070739 5270 Rosid View MSA
123753397 5271 Pentapetalae View MSA
122797404 5272 Eudicot View MSA
122050019 5273 Angiosperm View MSA
123429239 5275 Viridiplantae View MSA
121311688 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 194.073     High Low
cufflinks 292.158     High  
cufflinks 371.194     High High
cufflinks 292.224     High  
cufflinks 316.022     High  
cufflinks 296.585     High  

0 Strain