Gene : AT3G45660 A. thaliana TAIR10
Defline:  (1 of 7) PTHR11654//PTHR11654:SF19 - OLIGOPEPTIDE TRANSPORTER-RELATED // PROTEIN NRT1/ PTR FAMILY 2.1-RELATED Genomic Order:  3547
Name:  ? AT3G45660 Secondary Identifier:  ? PAC:19664686
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G45660 0.5kb upstream 0.5kb upstream 2537 true Chr3: 16761705-16764241 Arabidopsis thaliana
AT3G45660 0.5kb upstream 0.5kb upstream 500 false Chr3: 16761705-16762204 Arabidopsis thaliana
AT3G45660 0.5kb downstream 0.5kb downstream 2537 true Chr3: 16762205-16764741 Arabidopsis thaliana
AT3G45660 0.5kb downstream 0.5kb downstream 500 false Chr3: 16764242-16764741 Arabidopsis thaliana
AT3G45660 1.0kb upstream 1.0kb upstream 3037 true Chr3: 16761205-16764241 Arabidopsis thaliana
AT3G45660 1.0kb upstream 1.0kb upstream 1000 false Chr3: 16761205-16762204 Arabidopsis thaliana
AT3G45660 1.0kb downstream 1.0kb downstream 3037 true Chr3: 16762205-16765241 Arabidopsis thaliana
AT3G45660 1.0kb downstream 1.0kb downstream 1000 false Chr3: 16764242-16765241 Arabidopsis thaliana
AT3G45660 2.0kb upstream 2.0kb upstream 4037 true Chr3: 16760205-16764241 Arabidopsis thaliana
AT3G45660 2.0kb upstream 2.0kb upstream 2000 false Chr3: 16760205-16762204 Arabidopsis thaliana
AT3G45660 2.0kb downstream 2.0kb downstream 4037 true Chr3: 16762205-16766241 Arabidopsis thaliana
AT3G45660 2.0kb downstream 2.0kb downstream 2000 false Chr3: 16764242-16766241 Arabidopsis thaliana
AT3G45660 5.0kb upstream 5.0kb upstream 7037 true Chr3: 16757205-16764241 Arabidopsis thaliana
AT3G45660 5.0kb upstream 5.0kb upstream 5000 false Chr3: 16757205-16762204 Arabidopsis thaliana
AT3G45660 5.0kb downstream 5.0kb downstream 7037 true Chr3: 16762205-16769241 Arabidopsis thaliana
AT3G45660 5.0kb downstream 5.0kb downstream 5000 false Chr3: 16764242-16769241 Arabidopsis thaliana
AT3G45660 10.0kb upstream 10.0kb upstream 12037 true Chr3: 16752205-16764241 Arabidopsis thaliana
AT3G45660 10.0kb upstream 10.0kb upstream 10000 false Chr3: 16752205-16762204 Arabidopsis thaliana
AT3G45660 10.0kb downstream 10.0kb downstream 12037 true Chr3: 16762205-16774241 Arabidopsis thaliana
AT3G45660 10.0kb downstream 10.0kb downstream 10000 false Chr3: 16764242-16774241 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122344122 5261 Brassicaceae View MSA
123784171 5264 Brassicales-Malvales View MSA
124282369 5266 SBM View MSA
124136987 5268 Malvidae View MSA
124061783 5270 Rosid View MSA
123753488 5271 Pentapetalae View MSA
122795216 5272 Eudicot View MSA
122048463 5273 Angiosperm View MSA
121351774 5274 Embryophyte View MSA
123382317 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.05     Low  
cufflinks 1.769        
cufflinks 0.027     Low Low
cufflinks 2.024        
cufflinks 0.046     Low  
cufflinks 2.426        

0 Strain