Gene : AT3G45610 A. thaliana TAIR10
Defline:  (1 of 36) PF02701 - Dof domain, zinc finger (zf-Dof) Genomic Order:  3542
Name:  ? AT3G45610 Secondary Identifier:  ? PAC:19659548
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G45610 0.5kb upstream 0.5kb upstream 1657 true Chr3: 16739289-16740945 Arabidopsis thaliana
AT3G45610 0.5kb upstream 0.5kb upstream 500 false Chr3: 16740446-16740945 Arabidopsis thaliana
AT3G45610 0.5kb downstream 0.5kb downstream 1657 true Chr3: 16738789-16740445 Arabidopsis thaliana
AT3G45610 0.5kb downstream 0.5kb downstream 500 false Chr3: 16738789-16739288 Arabidopsis thaliana
AT3G45610 1.0kb upstream 1.0kb upstream 2157 true Chr3: 16739289-16741445 Arabidopsis thaliana
AT3G45610 1.0kb upstream 1.0kb upstream 1000 false Chr3: 16740446-16741445 Arabidopsis thaliana
AT3G45610 1.0kb downstream 1.0kb downstream 2157 true Chr3: 16738289-16740445 Arabidopsis thaliana
AT3G45610 1.0kb downstream 1.0kb downstream 1000 false Chr3: 16738289-16739288 Arabidopsis thaliana
AT3G45610 2.0kb upstream 2.0kb upstream 3157 true Chr3: 16739289-16742445 Arabidopsis thaliana
AT3G45610 2.0kb upstream 2.0kb upstream 2000 false Chr3: 16740446-16742445 Arabidopsis thaliana
AT3G45610 2.0kb downstream 2.0kb downstream 3157 true Chr3: 16737289-16740445 Arabidopsis thaliana
AT3G45610 2.0kb downstream 2.0kb downstream 2000 false Chr3: 16737289-16739288 Arabidopsis thaliana
AT3G45610 5.0kb upstream 5.0kb upstream 6157 true Chr3: 16739289-16745445 Arabidopsis thaliana
AT3G45610 5.0kb upstream 5.0kb upstream 5000 false Chr3: 16740446-16745445 Arabidopsis thaliana
AT3G45610 5.0kb downstream 5.0kb downstream 6157 true Chr3: 16734289-16740445 Arabidopsis thaliana
AT3G45610 5.0kb downstream 5.0kb downstream 5000 false Chr3: 16734289-16739288 Arabidopsis thaliana
AT3G45610 10.0kb upstream 10.0kb upstream 11157 true Chr3: 16739289-16750445 Arabidopsis thaliana
AT3G45610 10.0kb upstream 10.0kb upstream 10000 false Chr3: 16740446-16750445 Arabidopsis thaliana
AT3G45610 10.0kb downstream 10.0kb downstream 11157 true Chr3: 16729289-16740445 Arabidopsis thaliana
AT3G45610 10.0kb downstream 10.0kb downstream 10000 false Chr3: 16729289-16739288 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377034 5261 Brassicaceae View MSA
123801422 5264 Brassicales-Malvales View MSA
124298728 5266 SBM View MSA
124252714 5268 Malvidae View MSA
124067920 5270 Rosid View MSA
123748434 5271 Pentapetalae View MSA
122796456 5272 Eudicot View MSA
122050733 5273 Angiosperm View MSA
121349903 5274 Embryophyte View MSA
123427226 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.953        
cufflinks 3.953       High
cufflinks 1.984        
cufflinks 4.2       High
cufflinks 1.231       Low
cufflinks 2.342        

0 Strain