Gene : GRIK1 A. thaliana TAIR10
Primary Identifier:  ? AT3G45240 Defline:  (1 of 2) K07359 - calcium/calmodulin-dependent protein kinase kinase (CAMKK)
Genomic Order:  3504 Name:  ? AT3G45240
Secondary Identifier:  ? PAC:19661800
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G45240 0.5kb upstream 0.5kb upstream 3785 true Chr3: 16570478-16574262 Arabidopsis thaliana
AT3G45240 0.5kb upstream 0.5kb upstream 500 false Chr3: 16573763-16574262 Arabidopsis thaliana
AT3G45240 0.5kb downstream 0.5kb downstream 3785 true Chr3: 16569978-16573762 Arabidopsis thaliana
AT3G45240 0.5kb downstream 0.5kb downstream 500 false Chr3: 16569978-16570477 Arabidopsis thaliana
AT3G45240 1.0kb upstream 1.0kb upstream 4285 true Chr3: 16570478-16574762 Arabidopsis thaliana
AT3G45240 1.0kb upstream 1.0kb upstream 1000 false Chr3: 16573763-16574762 Arabidopsis thaliana
AT3G45240 1.0kb downstream 1.0kb downstream 4285 true Chr3: 16569478-16573762 Arabidopsis thaliana
AT3G45240 1.0kb downstream 1.0kb downstream 1000 false Chr3: 16569478-16570477 Arabidopsis thaliana
AT3G45240 2.0kb upstream 2.0kb upstream 5285 true Chr3: 16570478-16575762 Arabidopsis thaliana
AT3G45240 2.0kb upstream 2.0kb upstream 2000 false Chr3: 16573763-16575762 Arabidopsis thaliana
AT3G45240 2.0kb downstream 2.0kb downstream 5285 true Chr3: 16568478-16573762 Arabidopsis thaliana
AT3G45240 2.0kb downstream 2.0kb downstream 2000 false Chr3: 16568478-16570477 Arabidopsis thaliana
AT3G45240 5.0kb upstream 5.0kb upstream 8285 true Chr3: 16570478-16578762 Arabidopsis thaliana
AT3G45240 5.0kb upstream 5.0kb upstream 5000 false Chr3: 16573763-16578762 Arabidopsis thaliana
AT3G45240 5.0kb downstream 5.0kb downstream 8285 true Chr3: 16565478-16573762 Arabidopsis thaliana
AT3G45240 5.0kb downstream 5.0kb downstream 5000 false Chr3: 16565478-16570477 Arabidopsis thaliana
AT3G45240 10.0kb upstream 10.0kb upstream 13285 true Chr3: 16570478-16583762 Arabidopsis thaliana
AT3G45240 10.0kb upstream 10.0kb upstream 10000 false Chr3: 16573763-16583762 Arabidopsis thaliana
AT3G45240 10.0kb downstream 10.0kb downstream 13285 true Chr3: 16560478-16573762 Arabidopsis thaliana
AT3G45240 10.0kb downstream 10.0kb downstream 10000 false Chr3: 16560478-16570477 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377818 5261 Brassicaceae View MSA
123836917 5264 Brassicales-Malvales View MSA
124338594 5266 SBM View MSA
124238642 5268 Malvidae View MSA
124062424 5270 Rosid View MSA
123753521 5271 Pentapetalae View MSA
122797928 5272 Eudicot View MSA
122051434 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.018     Low Low
cufflinks 0.056     Low High
cufflinks 0.034     Low  
cufflinks 0.039     Low  
cufflinks 0.028     Low  
cufflinks 0.03     Low  

0 Strain