Gene : AT3G45850 A. thaliana TAIR10
Defline:  (1 of 2) PTHR24115//PTHR24115:SF515 - FAMILY NOT NAMED // KINESIN MOTOR PROTEIN-RELATED PROTEIN-RELATED Genomic Order:  3567
Name:  ? AT3G45850 Secondary Identifier:  ? PAC:19660959
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G45850 0.5kb upstream 0.5kb upstream 6416 true Chr3: 16855612-16862027 Arabidopsis thaliana
AT3G45850 0.5kb upstream 0.5kb upstream 500 false Chr3: 16861528-16862027 Arabidopsis thaliana
AT3G45850 0.5kb downstream 0.5kb downstream 6416 true Chr3: 16855112-16861527 Arabidopsis thaliana
AT3G45850 0.5kb downstream 0.5kb downstream 500 false Chr3: 16855112-16855611 Arabidopsis thaliana
AT3G45850 1.0kb upstream 1.0kb upstream 6916 true Chr3: 16855612-16862527 Arabidopsis thaliana
AT3G45850 1.0kb upstream 1.0kb upstream 1000 false Chr3: 16861528-16862527 Arabidopsis thaliana
AT3G45850 1.0kb downstream 1.0kb downstream 6916 true Chr3: 16854612-16861527 Arabidopsis thaliana
AT3G45850 1.0kb downstream 1.0kb downstream 1000 false Chr3: 16854612-16855611 Arabidopsis thaliana
AT3G45850 2.0kb upstream 2.0kb upstream 7916 true Chr3: 16855612-16863527 Arabidopsis thaliana
AT3G45850 2.0kb upstream 2.0kb upstream 2000 false Chr3: 16861528-16863527 Arabidopsis thaliana
AT3G45850 2.0kb downstream 2.0kb downstream 7916 true Chr3: 16853612-16861527 Arabidopsis thaliana
AT3G45850 2.0kb downstream 2.0kb downstream 2000 false Chr3: 16853612-16855611 Arabidopsis thaliana
AT3G45850 5.0kb upstream 5.0kb upstream 10916 true Chr3: 16855612-16866527 Arabidopsis thaliana
AT3G45850 5.0kb upstream 5.0kb upstream 5000 false Chr3: 16861528-16866527 Arabidopsis thaliana
AT3G45850 5.0kb downstream 5.0kb downstream 10916 true Chr3: 16850612-16861527 Arabidopsis thaliana
AT3G45850 5.0kb downstream 5.0kb downstream 5000 false Chr3: 16850612-16855611 Arabidopsis thaliana
AT3G45850 10.0kb upstream 10.0kb upstream 15916 true Chr3: 16855612-16871527 Arabidopsis thaliana
AT3G45850 10.0kb upstream 10.0kb upstream 10000 false Chr3: 16861528-16871527 Arabidopsis thaliana
AT3G45850 10.0kb downstream 10.0kb downstream 15916 true Chr3: 16845612-16861527 Arabidopsis thaliana
AT3G45850 10.0kb downstream 10.0kb downstream 10000 false Chr3: 16845612-16855611 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373145 5261 Brassicaceae View MSA
123837226 5264 Brassicales-Malvales View MSA
124343200 5266 SBM View MSA
124242621 5268 Malvidae View MSA
124061694 5270 Rosid View MSA
123740167 5271 Pentapetalae View MSA
122785848 5272 Eudicot View MSA
122043163 5273 Angiosperm View MSA
123429039 5275 Viridiplantae View MSA
121350162 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.177        
cufflinks 5.586        
cufflinks 5.98        
cufflinks 5.747        
cufflinks 4.218       Low
cufflinks 6.476        

0 Strain