Gene : AT3G45160 A. thaliana TAIR10
Defline:  Putative membrane lipoprotein Genomic Order:  3495
Name:  ? AT3G45160 Secondary Identifier:  ? PAC:19663401
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G45160 0.5kb upstream 0.5kb upstream 1132 true Chr3: 16533451-16534582 Arabidopsis thaliana
AT3G45160 0.5kb upstream 0.5kb upstream 500 false Chr3: 16534083-16534582 Arabidopsis thaliana
AT3G45160 0.5kb downstream 0.5kb downstream 1132 true Chr3: 16532951-16534082 Arabidopsis thaliana
AT3G45160 0.5kb downstream 0.5kb downstream 500 false Chr3: 16532951-16533450 Arabidopsis thaliana
AT3G45160 1.0kb upstream 1.0kb upstream 1632 true Chr3: 16533451-16535082 Arabidopsis thaliana
AT3G45160 1.0kb upstream 1.0kb upstream 1000 false Chr3: 16534083-16535082 Arabidopsis thaliana
AT3G45160 1.0kb downstream 1.0kb downstream 1632 true Chr3: 16532451-16534082 Arabidopsis thaliana
AT3G45160 1.0kb downstream 1.0kb downstream 1000 false Chr3: 16532451-16533450 Arabidopsis thaliana
AT3G45160 2.0kb upstream 2.0kb upstream 2632 true Chr3: 16533451-16536082 Arabidopsis thaliana
AT3G45160 2.0kb upstream 2.0kb upstream 2000 false Chr3: 16534083-16536082 Arabidopsis thaliana
AT3G45160 2.0kb downstream 2.0kb downstream 2632 true Chr3: 16531451-16534082 Arabidopsis thaliana
AT3G45160 2.0kb downstream 2.0kb downstream 2000 false Chr3: 16531451-16533450 Arabidopsis thaliana
AT3G45160 5.0kb upstream 5.0kb upstream 5632 true Chr3: 16533451-16539082 Arabidopsis thaliana
AT3G45160 5.0kb upstream 5.0kb upstream 5000 false Chr3: 16534083-16539082 Arabidopsis thaliana
AT3G45160 5.0kb downstream 5.0kb downstream 5632 true Chr3: 16528451-16534082 Arabidopsis thaliana
AT3G45160 5.0kb downstream 5.0kb downstream 5000 false Chr3: 16528451-16533450 Arabidopsis thaliana
AT3G45160 10.0kb upstream 10.0kb upstream 10632 true Chr3: 16533451-16544082 Arabidopsis thaliana
AT3G45160 10.0kb upstream 10.0kb upstream 10000 false Chr3: 16534083-16544082 Arabidopsis thaliana
AT3G45160 10.0kb downstream 10.0kb downstream 10632 true Chr3: 16523451-16534082 Arabidopsis thaliana
AT3G45160 10.0kb downstream 10.0kb downstream 10000 false Chr3: 16523451-16533450 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792140 5273 Angiosperm View MSA
122373398 5261 Brassicaceae View MSA
123835151 5264 Brassicales-Malvales View MSA
124343376 5266 SBM View MSA
124254519 5268 Malvidae View MSA
124063302 5270 Rosid View MSA
123747609 5271 Pentapetalae View MSA
122796574 5272 Eudicot View MSA
121063390 5274 Embryophyte View MSA
123103143 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 52.415     High  
cufflinks 1063.636     High High
cufflinks 28.993     High  
cufflinks 622.261     High  
cufflinks 13.191       Low
cufflinks 873.948     High  

0 Strain