Gene : AT3G44940 A. thaliana TAIR10
Defline:  (1 of 6) PF07795 - Protein of unknown function (DUF1635) (DUF1635) Genomic Order:  3473
Name:  ? AT3G44940 Secondary Identifier:  ? PAC:19664497
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G44940 0.5kb upstream 0.5kb upstream 2433 true Chr3: 16413334-16415766 Arabidopsis thaliana
AT3G44940 0.5kb upstream 0.5kb upstream 500 false Chr3: 16415267-16415766 Arabidopsis thaliana
AT3G44940 0.5kb downstream 0.5kb downstream 2433 true Chr3: 16412834-16415266 Arabidopsis thaliana
AT3G44940 0.5kb downstream 0.5kb downstream 500 false Chr3: 16412834-16413333 Arabidopsis thaliana
AT3G44940 1.0kb upstream 1.0kb upstream 2933 true Chr3: 16413334-16416266 Arabidopsis thaliana
AT3G44940 1.0kb upstream 1.0kb upstream 1000 false Chr3: 16415267-16416266 Arabidopsis thaliana
AT3G44940 1.0kb downstream 1.0kb downstream 2933 true Chr3: 16412334-16415266 Arabidopsis thaliana
AT3G44940 1.0kb downstream 1.0kb downstream 1000 false Chr3: 16412334-16413333 Arabidopsis thaliana
AT3G44940 2.0kb upstream 2.0kb upstream 3933 true Chr3: 16413334-16417266 Arabidopsis thaliana
AT3G44940 2.0kb upstream 2.0kb upstream 2000 false Chr3: 16415267-16417266 Arabidopsis thaliana
AT3G44940 2.0kb downstream 2.0kb downstream 3933 true Chr3: 16411334-16415266 Arabidopsis thaliana
AT3G44940 2.0kb downstream 2.0kb downstream 2000 false Chr3: 16411334-16413333 Arabidopsis thaliana
AT3G44940 5.0kb upstream 5.0kb upstream 6933 true Chr3: 16413334-16420266 Arabidopsis thaliana
AT3G44940 5.0kb upstream 5.0kb upstream 5000 false Chr3: 16415267-16420266 Arabidopsis thaliana
AT3G44940 5.0kb downstream 5.0kb downstream 6933 true Chr3: 16408334-16415266 Arabidopsis thaliana
AT3G44940 5.0kb downstream 5.0kb downstream 5000 false Chr3: 16408334-16413333 Arabidopsis thaliana
AT3G44940 10.0kb upstream 10.0kb upstream 11933 true Chr3: 16413334-16425266 Arabidopsis thaliana
AT3G44940 10.0kb upstream 10.0kb upstream 10000 false Chr3: 16415267-16425266 Arabidopsis thaliana
AT3G44940 10.0kb downstream 10.0kb downstream 11933 true Chr3: 16403334-16415266 Arabidopsis thaliana
AT3G44940 10.0kb downstream 10.0kb downstream 10000 false Chr3: 16403334-16413333 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368598 5261 Brassicaceae View MSA
123840577 5264 Brassicales-Malvales View MSA
124346047 5266 SBM View MSA
124244308 5268 Malvidae View MSA
124069080 5270 Rosid View MSA
123751096 5271 Pentapetalae View MSA
122788553 5272 Eudicot View MSA
122048451 5273 Angiosperm View MSA
121310976 5274 Embryophyte View MSA
123348340 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.946        
cufflinks 14.087        
cufflinks 1.218        
cufflinks 12.099        
cufflinks 0.922       Low
cufflinks 15.207        

0 Strain