Gene : SETH2 A. thaliana TAIR10
Primary Identifier:  ? AT3G45100 Defline:  (1 of 1) K03857 - phosphatidylinositol glycan, class A (PIGA, GPI3)
Genomic Order:  3490 Name:  ? AT3G45100
Secondary Identifier:  ? PAC:19662928
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G45100 0.5kb upstream 0.5kb upstream 3445 true Chr3: 16503960-16507404 Arabidopsis thaliana
AT3G45100 0.5kb upstream 0.5kb upstream 500 false Chr3: 16503960-16504459 Arabidopsis thaliana
AT3G45100 0.5kb downstream 0.5kb downstream 3445 true Chr3: 16504460-16507904 Arabidopsis thaliana
AT3G45100 0.5kb downstream 0.5kb downstream 500 false Chr3: 16507405-16507904 Arabidopsis thaliana
AT3G45100 1.0kb upstream 1.0kb upstream 3945 true Chr3: 16503460-16507404 Arabidopsis thaliana
AT3G45100 1.0kb upstream 1.0kb upstream 1000 false Chr3: 16503460-16504459 Arabidopsis thaliana
AT3G45100 1.0kb downstream 1.0kb downstream 3945 true Chr3: 16504460-16508404 Arabidopsis thaliana
AT3G45100 1.0kb downstream 1.0kb downstream 1000 false Chr3: 16507405-16508404 Arabidopsis thaliana
AT3G45100 2.0kb upstream 2.0kb upstream 4945 true Chr3: 16502460-16507404 Arabidopsis thaliana
AT3G45100 2.0kb upstream 2.0kb upstream 2000 false Chr3: 16502460-16504459 Arabidopsis thaliana
AT3G45100 2.0kb downstream 2.0kb downstream 4945 true Chr3: 16504460-16509404 Arabidopsis thaliana
AT3G45100 2.0kb downstream 2.0kb downstream 2000 false Chr3: 16507405-16509404 Arabidopsis thaliana
AT3G45100 5.0kb upstream 5.0kb upstream 7945 true Chr3: 16499460-16507404 Arabidopsis thaliana
AT3G45100 5.0kb upstream 5.0kb upstream 5000 false Chr3: 16499460-16504459 Arabidopsis thaliana
AT3G45100 5.0kb downstream 5.0kb downstream 7945 true Chr3: 16504460-16512404 Arabidopsis thaliana
AT3G45100 5.0kb downstream 5.0kb downstream 5000 false Chr3: 16507405-16512404 Arabidopsis thaliana
AT3G45100 10.0kb upstream 10.0kb upstream 12945 true Chr3: 16494460-16507404 Arabidopsis thaliana
AT3G45100 10.0kb upstream 10.0kb upstream 10000 false Chr3: 16494460-16504459 Arabidopsis thaliana
AT3G45100 10.0kb downstream 10.0kb downstream 12945 true Chr3: 16504460-16517404 Arabidopsis thaliana
AT3G45100 10.0kb downstream 10.0kb downstream 10000 false Chr3: 16507405-16517404 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368835 5261 Brassicaceae View MSA
123831035 5264 Brassicales-Malvales View MSA
124336616 5266 SBM View MSA
124237423 5268 Malvidae View MSA
124063520 5270 Rosid View MSA
123741012 5271 Pentapetalae View MSA
122789718 5272 Eudicot View MSA
122046475 5273 Angiosperm View MSA
123429006 5275 Viridiplantae View MSA
121346219 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.938        
cufflinks 5.12       High
cufflinks 2.758       Low
cufflinks 4.976       High
cufflinks 3.009        
cufflinks 3.923        

0 Strain