Gene : AT3G44740 A. thaliana TAIR10
Defline:  (1 of 3) K01880 - glycyl-tRNA synthetase (GARS, glyS1) Genomic Order:  3447
Name:  ? AT3G44740 Secondary Identifier:  ? PAC:19659992
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana TRNA-CHARGING-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G44740 0.5kb upstream 0.5kb upstream 2336 true Chr3: 16295970-16298305 Arabidopsis thaliana
AT3G44740 0.5kb upstream 0.5kb upstream 500 false Chr3: 16297806-16298305 Arabidopsis thaliana
AT3G44740 0.5kb downstream 0.5kb downstream 2336 true Chr3: 16295470-16297805 Arabidopsis thaliana
AT3G44740 0.5kb downstream 0.5kb downstream 500 false Chr3: 16295470-16295969 Arabidopsis thaliana
AT3G44740 1.0kb upstream 1.0kb upstream 2836 true Chr3: 16295970-16298805 Arabidopsis thaliana
AT3G44740 1.0kb upstream 1.0kb upstream 1000 false Chr3: 16297806-16298805 Arabidopsis thaliana
AT3G44740 1.0kb downstream 1.0kb downstream 2836 true Chr3: 16294970-16297805 Arabidopsis thaliana
AT3G44740 1.0kb downstream 1.0kb downstream 1000 false Chr3: 16294970-16295969 Arabidopsis thaliana
AT3G44740 2.0kb upstream 2.0kb upstream 3836 true Chr3: 16295970-16299805 Arabidopsis thaliana
AT3G44740 2.0kb upstream 2.0kb upstream 2000 false Chr3: 16297806-16299805 Arabidopsis thaliana
AT3G44740 2.0kb downstream 2.0kb downstream 3836 true Chr3: 16293970-16297805 Arabidopsis thaliana
AT3G44740 2.0kb downstream 2.0kb downstream 2000 false Chr3: 16293970-16295969 Arabidopsis thaliana
AT3G44740 5.0kb upstream 5.0kb upstream 6836 true Chr3: 16295970-16302805 Arabidopsis thaliana
AT3G44740 5.0kb upstream 5.0kb upstream 5000 false Chr3: 16297806-16302805 Arabidopsis thaliana
AT3G44740 5.0kb downstream 5.0kb downstream 6836 true Chr3: 16290970-16297805 Arabidopsis thaliana
AT3G44740 5.0kb downstream 5.0kb downstream 5000 false Chr3: 16290970-16295969 Arabidopsis thaliana
AT3G44740 10.0kb upstream 10.0kb upstream 11836 true Chr3: 16295970-16307805 Arabidopsis thaliana
AT3G44740 10.0kb upstream 10.0kb upstream 10000 false Chr3: 16297806-16307805 Arabidopsis thaliana
AT3G44740 10.0kb downstream 10.0kb downstream 11836 true Chr3: 16285970-16297805 Arabidopsis thaliana
AT3G44740 10.0kb downstream 10.0kb downstream 10000 false Chr3: 16285970-16295969 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121494217 5273 Angiosperm Singleton cluster - no MSA
122329814 5261 Brassicaceae Singleton cluster - no MSA
123771099 5264 Brassicales-Malvales Singleton cluster - no MSA
124269632 5266 SBM Singleton cluster - no MSA
124125761 5268 Malvidae Singleton cluster - no MSA
123854715 5270 Rosid Singleton cluster - no MSA
123440724 5271 Pentapetalae Singleton cluster - no MSA
122476309 5272 Eudicot Singleton cluster - no MSA
120767586 5274 Embryophyte Singleton cluster - no MSA
122809981 5275 Viridiplantae Singleton cluster - no MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.872        
cufflinks 6.204       High
cufflinks 3.701        
cufflinks 5.57        
cufflinks 2.899       Low
cufflinks 5.409        

0 Strain