Gene : HDA3 A. thaliana TAIR10
Primary Identifier:  ? AT3G44750 Defline:  (1 of 1) PF03066 - Nucleoplasmin (Nucleoplasmin)
Genomic Order:  3448 Name:  ? AT3G44750
Secondary Identifier:  ? PAC:19665087
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Genomics

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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G44750 0.5kb upstream 0.5kb upstream 2369 true Chr3: 16297479-16299847 Arabidopsis thaliana
AT3G44750 0.5kb upstream 0.5kb upstream 500 false Chr3: 16297479-16297978 Arabidopsis thaliana
AT3G44750 0.5kb downstream 0.5kb downstream 2369 true Chr3: 16297979-16300347 Arabidopsis thaliana
AT3G44750 0.5kb downstream 0.5kb downstream 500 false Chr3: 16299848-16300347 Arabidopsis thaliana
AT3G44750 1.0kb upstream 1.0kb upstream 2869 true Chr3: 16296979-16299847 Arabidopsis thaliana
AT3G44750 1.0kb upstream 1.0kb upstream 1000 false Chr3: 16296979-16297978 Arabidopsis thaliana
AT3G44750 1.0kb downstream 1.0kb downstream 2869 true Chr3: 16297979-16300847 Arabidopsis thaliana
AT3G44750 1.0kb downstream 1.0kb downstream 1000 false Chr3: 16299848-16300847 Arabidopsis thaliana
AT3G44750 2.0kb upstream 2.0kb upstream 3869 true Chr3: 16295979-16299847 Arabidopsis thaliana
AT3G44750 2.0kb upstream 2.0kb upstream 2000 false Chr3: 16295979-16297978 Arabidopsis thaliana
AT3G44750 2.0kb downstream 2.0kb downstream 3869 true Chr3: 16297979-16301847 Arabidopsis thaliana
AT3G44750 2.0kb downstream 2.0kb downstream 2000 false Chr3: 16299848-16301847 Arabidopsis thaliana
AT3G44750 5.0kb upstream 5.0kb upstream 6869 true Chr3: 16292979-16299847 Arabidopsis thaliana
AT3G44750 5.0kb upstream 5.0kb upstream 5000 false Chr3: 16292979-16297978 Arabidopsis thaliana
AT3G44750 5.0kb downstream 5.0kb downstream 6869 true Chr3: 16297979-16304847 Arabidopsis thaliana
AT3G44750 5.0kb downstream 5.0kb downstream 5000 false Chr3: 16299848-16304847 Arabidopsis thaliana
AT3G44750 10.0kb upstream 10.0kb upstream 11869 true Chr3: 16287979-16299847 Arabidopsis thaliana
AT3G44750 10.0kb upstream 10.0kb upstream 10000 false Chr3: 16287979-16297978 Arabidopsis thaliana
AT3G44750 10.0kb downstream 10.0kb downstream 11869 true Chr3: 16297979-16309847 Arabidopsis thaliana
AT3G44750 10.0kb downstream 10.0kb downstream 10000 false Chr3: 16299848-16309847 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377674 5261 Brassicaceae View MSA
123839233 5264 Brassicales-Malvales View MSA
124343902 5266 SBM View MSA
124252646 5268 Malvidae View MSA
124068201 5270 Rosid View MSA
123749750 5271 Pentapetalae View MSA
122797243 5272 Eudicot View MSA
122051478 5273 Angiosperm View MSA
123428998 5275 Viridiplantae View MSA
121349885 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.81        
cufflinks 17.833        
cufflinks 8.704        
cufflinks 19.187        
cufflinks 6.542       Low
cufflinks 23.561       High

0 Strain