Gene : AT3G44590 A. thaliana TAIR10
Defline:  (1 of 5) K02943 - large subunit ribosomal protein LP2 (RP-LP2, RPLP2) Genomic Order:  3429
Name:  ? AT3G44590 Secondary Identifier:  ? PAC:19660498
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G44590 0.5kb upstream 0.5kb upstream 1615 true Chr3: 16163317-16164931 Arabidopsis thaliana
AT3G44590 0.5kb upstream 0.5kb upstream 500 false Chr3: 16163317-16163816 Arabidopsis thaliana
AT3G44590 0.5kb downstream 0.5kb downstream 1615 true Chr3: 16163817-16165431 Arabidopsis thaliana
AT3G44590 0.5kb downstream 0.5kb downstream 500 false Chr3: 16164932-16165431 Arabidopsis thaliana
AT3G44590 1.0kb upstream 1.0kb upstream 2115 true Chr3: 16162817-16164931 Arabidopsis thaliana
AT3G44590 1.0kb upstream 1.0kb upstream 1000 false Chr3: 16162817-16163816 Arabidopsis thaliana
AT3G44590 1.0kb downstream 1.0kb downstream 2115 true Chr3: 16163817-16165931 Arabidopsis thaliana
AT3G44590 1.0kb downstream 1.0kb downstream 1000 false Chr3: 16164932-16165931 Arabidopsis thaliana
AT3G44590 2.0kb upstream 2.0kb upstream 3115 true Chr3: 16161817-16164931 Arabidopsis thaliana
AT3G44590 2.0kb upstream 2.0kb upstream 2000 false Chr3: 16161817-16163816 Arabidopsis thaliana
AT3G44590 2.0kb downstream 2.0kb downstream 3115 true Chr3: 16163817-16166931 Arabidopsis thaliana
AT3G44590 2.0kb downstream 2.0kb downstream 2000 false Chr3: 16164932-16166931 Arabidopsis thaliana
AT3G44590 5.0kb upstream 5.0kb upstream 6115 true Chr3: 16158817-16164931 Arabidopsis thaliana
AT3G44590 5.0kb upstream 5.0kb upstream 5000 false Chr3: 16158817-16163816 Arabidopsis thaliana
AT3G44590 5.0kb downstream 5.0kb downstream 6115 true Chr3: 16163817-16169931 Arabidopsis thaliana
AT3G44590 5.0kb downstream 5.0kb downstream 5000 false Chr3: 16164932-16169931 Arabidopsis thaliana
AT3G44590 10.0kb upstream 10.0kb upstream 11115 true Chr3: 16153817-16164931 Arabidopsis thaliana
AT3G44590 10.0kb upstream 10.0kb upstream 10000 false Chr3: 16153817-16163816 Arabidopsis thaliana
AT3G44590 10.0kb downstream 10.0kb downstream 11115 true Chr3: 16163817-16174931 Arabidopsis thaliana
AT3G44590 10.0kb downstream 10.0kb downstream 10000 false Chr3: 16164932-16174931 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041516 5273 Angiosperm View MSA
122380171 5261 Brassicaceae View MSA
123838881 5264 Brassicales-Malvales View MSA
124349762 5266 SBM View MSA
124251288 5268 Malvidae View MSA
124073066 5270 Rosid View MSA
123742141 5271 Pentapetalae View MSA
122795888 5272 Eudicot View MSA
123429183 5275 Viridiplantae View MSA
121351420 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.43        
cufflinks 15.567        
cufflinks 8.586        
cufflinks 15.483        
cufflinks 6.229       Low
cufflinks 17.71       High

0 Strain