Gene : CYP71 A. thaliana TAIR10
Primary Identifier:  ? AT3G44600 Defline:  (1 of 1) K12736 - peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:5.2.1.8] (PPWD1)
Genomic Order:  3430 Name:  ? AT3G44600
Secondary Identifier:  ? PAC:19662299
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G44600 0.5kb upstream 0.5kb upstream 4828 true Chr3: 16164935-16169762 Arabidopsis thaliana
AT3G44600 0.5kb upstream 0.5kb upstream 500 false Chr3: 16169263-16169762 Arabidopsis thaliana
AT3G44600 0.5kb downstream 0.5kb downstream 4828 true Chr3: 16164435-16169262 Arabidopsis thaliana
AT3G44600 0.5kb downstream 0.5kb downstream 500 false Chr3: 16164435-16164934 Arabidopsis thaliana
AT3G44600 1.0kb upstream 1.0kb upstream 5328 true Chr3: 16164935-16170262 Arabidopsis thaliana
AT3G44600 1.0kb upstream 1.0kb upstream 1000 false Chr3: 16169263-16170262 Arabidopsis thaliana
AT3G44600 1.0kb downstream 1.0kb downstream 5328 true Chr3: 16163935-16169262 Arabidopsis thaliana
AT3G44600 1.0kb downstream 1.0kb downstream 1000 false Chr3: 16163935-16164934 Arabidopsis thaliana
AT3G44600 2.0kb upstream 2.0kb upstream 6328 true Chr3: 16164935-16171262 Arabidopsis thaliana
AT3G44600 2.0kb upstream 2.0kb upstream 2000 false Chr3: 16169263-16171262 Arabidopsis thaliana
AT3G44600 2.0kb downstream 2.0kb downstream 6328 true Chr3: 16162935-16169262 Arabidopsis thaliana
AT3G44600 2.0kb downstream 2.0kb downstream 2000 false Chr3: 16162935-16164934 Arabidopsis thaliana
AT3G44600 5.0kb upstream 5.0kb upstream 9328 true Chr3: 16164935-16174262 Arabidopsis thaliana
AT3G44600 5.0kb upstream 5.0kb upstream 5000 false Chr3: 16169263-16174262 Arabidopsis thaliana
AT3G44600 5.0kb downstream 5.0kb downstream 9328 true Chr3: 16159935-16169262 Arabidopsis thaliana
AT3G44600 5.0kb downstream 5.0kb downstream 5000 false Chr3: 16159935-16164934 Arabidopsis thaliana
AT3G44600 10.0kb upstream 10.0kb upstream 14328 true Chr3: 16164935-16179262 Arabidopsis thaliana
AT3G44600 10.0kb upstream 10.0kb upstream 10000 false Chr3: 16169263-16179262 Arabidopsis thaliana
AT3G44600 10.0kb downstream 10.0kb downstream 14328 true Chr3: 16154935-16169262 Arabidopsis thaliana
AT3G44600 10.0kb downstream 10.0kb downstream 10000 false Chr3: 16154935-16164934 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041059 5273 Angiosperm View MSA
122364287 5261 Brassicaceae View MSA
123828595 5264 Brassicales-Malvales View MSA
124345177 5266 SBM View MSA
124252700 5268 Malvidae View MSA
124067413 5270 Rosid View MSA
123745909 5271 Pentapetalae View MSA
122789860 5272 Eudicot View MSA
121344442 5274 Embryophyte View MSA
123425036 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.327        
cufflinks 11.832        
cufflinks 6.925       Low
cufflinks 12.398        
cufflinks 6.973       Low
cufflinks 12.112        

0 Strain