Gene : NEK6 A. thaliana TAIR10
Primary Identifier:  ? AT3G44200 Defline:  (1 of 2) PTHR24362//PTHR24362:SF258 - SERINE/THREONINE-PROTEIN KINASE NEK // SERINE/THREONINE-PROTEIN KINASE NEK5
Genomic Order:  3394 Name:  ? AT3G44200
Secondary Identifier:  ? PAC:19661805
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G44200 0.5kb upstream 0.5kb upstream 5535 true Chr3: 15905940-15911474 Arabidopsis thaliana
AT3G44200 0.5kb upstream 0.5kb upstream 500 false Chr3: 15905940-15906439 Arabidopsis thaliana
AT3G44200 0.5kb downstream 0.5kb downstream 5535 true Chr3: 15906440-15911974 Arabidopsis thaliana
AT3G44200 0.5kb downstream 0.5kb downstream 500 false Chr3: 15911475-15911974 Arabidopsis thaliana
AT3G44200 1.0kb upstream 1.0kb upstream 6035 true Chr3: 15905440-15911474 Arabidopsis thaliana
AT3G44200 1.0kb upstream 1.0kb upstream 1000 false Chr3: 15905440-15906439 Arabidopsis thaliana
AT3G44200 1.0kb downstream 1.0kb downstream 6035 true Chr3: 15906440-15912474 Arabidopsis thaliana
AT3G44200 1.0kb downstream 1.0kb downstream 1000 false Chr3: 15911475-15912474 Arabidopsis thaliana
AT3G44200 2.0kb upstream 2.0kb upstream 7035 true Chr3: 15904440-15911474 Arabidopsis thaliana
AT3G44200 2.0kb upstream 2.0kb upstream 2000 false Chr3: 15904440-15906439 Arabidopsis thaliana
AT3G44200 2.0kb downstream 2.0kb downstream 7035 true Chr3: 15906440-15913474 Arabidopsis thaliana
AT3G44200 2.0kb downstream 2.0kb downstream 2000 false Chr3: 15911475-15913474 Arabidopsis thaliana
AT3G44200 5.0kb upstream 5.0kb upstream 10035 true Chr3: 15901440-15911474 Arabidopsis thaliana
AT3G44200 5.0kb upstream 5.0kb upstream 5000 false Chr3: 15901440-15906439 Arabidopsis thaliana
AT3G44200 5.0kb downstream 5.0kb downstream 10035 true Chr3: 15906440-15916474 Arabidopsis thaliana
AT3G44200 5.0kb downstream 5.0kb downstream 5000 false Chr3: 15911475-15916474 Arabidopsis thaliana
AT3G44200 10.0kb upstream 10.0kb upstream 15035 true Chr3: 15896440-15911474 Arabidopsis thaliana
AT3G44200 10.0kb upstream 10.0kb upstream 10000 false Chr3: 15896440-15906439 Arabidopsis thaliana
AT3G44200 10.0kb downstream 10.0kb downstream 15035 true Chr3: 15906440-15921474 Arabidopsis thaliana
AT3G44200 10.0kb downstream 10.0kb downstream 10000 false Chr3: 15911475-15921474 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374532 5261 Brassicaceae View MSA
123839261 5264 Brassicales-Malvales View MSA
124340083 5266 SBM View MSA
124248486 5268 Malvidae View MSA
124063961 5270 Rosid View MSA
123747232 5271 Pentapetalae View MSA
122789599 5272 Eudicot View MSA
122047293 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351770 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.116        
cufflinks 10.843        
cufflinks 3.961       Low
cufflinks 11.807        
cufflinks 4.099       Low
cufflinks 13.087       High

0 Strain