Sequence Feature Displayer
Ontology Annotation Displayer
2 Pathways
Pathway Identifier | Organism Name | Analysis Method | Analysis Status |
---|---|---|---|
Athaliana PWY-6351 | Arabidopsis thaliana | pathologic | |
Athaliana PWY-6352 | Arabidopsis thaliana | pathologic |
Other
20 Flanking Regions
Region Name | Flank Size | Direction | Length | Gene Included? | Chromosome Location | Organism Name |
---|---|---|---|---|---|---|
AT3G43950 0.5kb upstream | 0.5kb | upstream | 1154 | true | Chr3: 15765861-15767014 | Arabidopsis thaliana |
AT3G43950 0.5kb upstream | 0.5kb | upstream | 500 | false | Chr3: 15765861-15766360 | Arabidopsis thaliana |
AT3G43950 0.5kb downstream | 0.5kb | downstream | 1154 | true | Chr3: 15766361-15767514 | Arabidopsis thaliana |
AT3G43950 0.5kb downstream | 0.5kb | downstream | 500 | false | Chr3: 15767015-15767514 | Arabidopsis thaliana |
AT3G43950 1.0kb upstream | 1.0kb | upstream | 1654 | true | Chr3: 15765361-15767014 | Arabidopsis thaliana |
AT3G43950 1.0kb upstream | 1.0kb | upstream | 1000 | false | Chr3: 15765361-15766360 | Arabidopsis thaliana |
AT3G43950 1.0kb downstream | 1.0kb | downstream | 1654 | true | Chr3: 15766361-15768014 | Arabidopsis thaliana |
AT3G43950 1.0kb downstream | 1.0kb | downstream | 1000 | false | Chr3: 15767015-15768014 | Arabidopsis thaliana |
AT3G43950 2.0kb upstream | 2.0kb | upstream | 2654 | true | Chr3: 15764361-15767014 | Arabidopsis thaliana |
AT3G43950 2.0kb upstream | 2.0kb | upstream | 2000 | false | Chr3: 15764361-15766360 | Arabidopsis thaliana |
AT3G43950 2.0kb downstream | 2.0kb | downstream | 2654 | true | Chr3: 15766361-15769014 | Arabidopsis thaliana |
AT3G43950 2.0kb downstream | 2.0kb | downstream | 2000 | false | Chr3: 15767015-15769014 | Arabidopsis thaliana |
AT3G43950 5.0kb upstream | 5.0kb | upstream | 5654 | true | Chr3: 15761361-15767014 | Arabidopsis thaliana |
AT3G43950 5.0kb upstream | 5.0kb | upstream | 5000 | false | Chr3: 15761361-15766360 | Arabidopsis thaliana |
AT3G43950 5.0kb downstream | 5.0kb | downstream | 5654 | true | Chr3: 15766361-15772014 | Arabidopsis thaliana |
AT3G43950 5.0kb downstream | 5.0kb | downstream | 5000 | false | Chr3: 15767015-15772014 | Arabidopsis thaliana |
AT3G43950 10.0kb upstream | 10.0kb | upstream | 10654 | true | Chr3: 15756361-15767014 | Arabidopsis thaliana |
AT3G43950 10.0kb upstream | 10.0kb | upstream | 10000 | false | Chr3: 15756361-15766360 | Arabidopsis thaliana |
AT3G43950 10.0kb downstream | 10.0kb | downstream | 10654 | true | Chr3: 15766361-15777014 | Arabidopsis thaliana |
AT3G43950 10.0kb downstream | 10.0kb | downstream | 10000 | false | Chr3: 15767015-15777014 | Arabidopsis thaliana |
10 Protein Familys
Cluster ID | Method ID | Method Name | Sequence Alignment |
---|---|---|---|
121779288 | 5273 | Angiosperm | View MSA |
122375758 | 5261 | Brassicaceae | View MSA |
123801046 | 5264 | Brassicales-Malvales | View MSA |
124298391 | 5266 | SBM | View MSA |
124247939 | 5268 | Malvidae | View MSA |
124038015 | 5270 | Rosid | View MSA |
123741858 | 5271 | Pentapetalae | View MSA |
122770145 | 5272 | Eudicot | View MSA |
123429040 | 5275 | Viridiplantae | View MSA |
121050961 | 5274 | Embryophyte | View MSA |
6 Rna Seq Expressionss
Analysis Method | Abundance | Low Confidence Limit | High Confidence Limit | Relative Library Expression | Relative Locus Expression |
---|---|---|---|---|---|
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.017 | Low | |||
cufflinks | 0.0 | Not Expressed | Not Expressed |