Gene : AAO2 A. thaliana TAIR10
Primary Identifier:  ? AT3G43600 Defline:  (1 of 2) K11817 - indole-3-acetaldehyde oxidase (AAO1_2)
Genomic Order:  3339 Name:  ? AT3G43600
Secondary Identifier:  ? PAC:19662761
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Expression

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5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G43600 0.5kb upstream 0.5kb upstream 5400 true Chr3: 15512607-15518006 Arabidopsis thaliana
AT3G43600 0.5kb upstream 0.5kb upstream 500 false Chr3: 15517507-15518006 Arabidopsis thaliana
AT3G43600 0.5kb downstream 0.5kb downstream 5400 true Chr3: 15512107-15517506 Arabidopsis thaliana
AT3G43600 0.5kb downstream 0.5kb downstream 500 false Chr3: 15512107-15512606 Arabidopsis thaliana
AT3G43600 1.0kb upstream 1.0kb upstream 5900 true Chr3: 15512607-15518506 Arabidopsis thaliana
AT3G43600 1.0kb upstream 1.0kb upstream 1000 false Chr3: 15517507-15518506 Arabidopsis thaliana
AT3G43600 1.0kb downstream 1.0kb downstream 5900 true Chr3: 15511607-15517506 Arabidopsis thaliana
AT3G43600 1.0kb downstream 1.0kb downstream 1000 false Chr3: 15511607-15512606 Arabidopsis thaliana
AT3G43600 2.0kb upstream 2.0kb upstream 6900 true Chr3: 15512607-15519506 Arabidopsis thaliana
AT3G43600 2.0kb upstream 2.0kb upstream 2000 false Chr3: 15517507-15519506 Arabidopsis thaliana
AT3G43600 2.0kb downstream 2.0kb downstream 6900 true Chr3: 15510607-15517506 Arabidopsis thaliana
AT3G43600 2.0kb downstream 2.0kb downstream 2000 false Chr3: 15510607-15512606 Arabidopsis thaliana
AT3G43600 5.0kb upstream 5.0kb upstream 9900 true Chr3: 15512607-15522506 Arabidopsis thaliana
AT3G43600 5.0kb upstream 5.0kb upstream 5000 false Chr3: 15517507-15522506 Arabidopsis thaliana
AT3G43600 5.0kb downstream 5.0kb downstream 9900 true Chr3: 15507607-15517506 Arabidopsis thaliana
AT3G43600 5.0kb downstream 5.0kb downstream 5000 false Chr3: 15507607-15512606 Arabidopsis thaliana
AT3G43600 10.0kb upstream 10.0kb upstream 14900 true Chr3: 15512607-15527506 Arabidopsis thaliana
AT3G43600 10.0kb upstream 10.0kb upstream 10000 false Chr3: 15517507-15527506 Arabidopsis thaliana
AT3G43600 10.0kb downstream 10.0kb downstream 14900 true Chr3: 15502607-15517506 Arabidopsis thaliana
AT3G43600 10.0kb downstream 10.0kb downstream 10000 false Chr3: 15502607-15512606 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366899 5261 Brassicaceae View MSA
123839082 5264 Brassicales-Malvales View MSA
124342435 5266 SBM View MSA
124239057 5268 Malvidae View MSA
124064752 5270 Rosid View MSA
123746349 5271 Pentapetalae View MSA
122793870 5272 Eudicot View MSA
122051504 5273 Angiosperm View MSA
121345384 5274 Embryophyte View MSA
123426829 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.799        
cufflinks 18.25       High
cufflinks 5.06        
cufflinks 14.076        
cufflinks 4.127       Low
cufflinks 17.522        

0 Strain