Gene : AT3G43240 A. thaliana TAIR10
Defline:  (1 of 1) PTHR22970//PTHR22970:SF21 - FAMILY NOT NAMED // AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4 Genomic Order:  3308
Name:  ? AT3G43240 Secondary Identifier:  ? PAC:19665079
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G43240 0.5kb upstream 0.5kb upstream 5307 true Chr3: 15209936-15215242 Arabidopsis thaliana
AT3G43240 0.5kb upstream 0.5kb upstream 500 false Chr3: 15214743-15215242 Arabidopsis thaliana
AT3G43240 0.5kb downstream 0.5kb downstream 5307 true Chr3: 15209436-15214742 Arabidopsis thaliana
AT3G43240 0.5kb downstream 0.5kb downstream 500 false Chr3: 15209436-15209935 Arabidopsis thaliana
AT3G43240 1.0kb upstream 1.0kb upstream 5807 true Chr3: 15209936-15215742 Arabidopsis thaliana
AT3G43240 1.0kb upstream 1.0kb upstream 1000 false Chr3: 15214743-15215742 Arabidopsis thaliana
AT3G43240 1.0kb downstream 1.0kb downstream 5807 true Chr3: 15208936-15214742 Arabidopsis thaliana
AT3G43240 1.0kb downstream 1.0kb downstream 1000 false Chr3: 15208936-15209935 Arabidopsis thaliana
AT3G43240 2.0kb upstream 2.0kb upstream 6807 true Chr3: 15209936-15216742 Arabidopsis thaliana
AT3G43240 2.0kb upstream 2.0kb upstream 2000 false Chr3: 15214743-15216742 Arabidopsis thaliana
AT3G43240 2.0kb downstream 2.0kb downstream 6807 true Chr3: 15207936-15214742 Arabidopsis thaliana
AT3G43240 2.0kb downstream 2.0kb downstream 2000 false Chr3: 15207936-15209935 Arabidopsis thaliana
AT3G43240 5.0kb upstream 5.0kb upstream 9807 true Chr3: 15209936-15219742 Arabidopsis thaliana
AT3G43240 5.0kb upstream 5.0kb upstream 5000 false Chr3: 15214743-15219742 Arabidopsis thaliana
AT3G43240 5.0kb downstream 5.0kb downstream 9807 true Chr3: 15204936-15214742 Arabidopsis thaliana
AT3G43240 5.0kb downstream 5.0kb downstream 5000 false Chr3: 15204936-15209935 Arabidopsis thaliana
AT3G43240 10.0kb upstream 10.0kb upstream 14807 true Chr3: 15209936-15224742 Arabidopsis thaliana
AT3G43240 10.0kb upstream 10.0kb upstream 10000 false Chr3: 15214743-15224742 Arabidopsis thaliana
AT3G43240 10.0kb downstream 10.0kb downstream 14807 true Chr3: 15199936-15214742 Arabidopsis thaliana
AT3G43240 10.0kb downstream 10.0kb downstream 10000 false Chr3: 15199936-15209935 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364284 5261 Brassicaceae View MSA
123829589 5264 Brassicales-Malvales View MSA
124341801 5266 SBM View MSA
124240541 5268 Malvidae View MSA
124071086 5270 Rosid View MSA
123740684 5271 Pentapetalae View MSA
122786718 5272 Eudicot View MSA
122047825 5273 Angiosperm View MSA
123428877 5275 Viridiplantae View MSA
121349653 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.881        
cufflinks 12.664        
cufflinks 6.369       Low
cufflinks 13.561        
cufflinks 7.196        
cufflinks 13.205        

0 Strain